Fish Single-cell RNA Database

GENE ID: ENSDARG00000026084

Symbol	Location	Gene type	Genome version	Species
si:dkey-43k4.5	6: 21633286 ~ 21678263 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000026084 (si:dkey-43k4.5), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000057468	kcnc2	4: 2060524 ~ 2196928 (-)
ENSDARG00000036135	bbox1	7: 34296789 ~ 34315291 (+)
ENSDARG00000078650	kcna4	7: 32595981 ~ 32599669 (-)
ENSDARG00000091130	kcnq2b	6: 58406014 ~ 58499844 (+)
ENSDARG00000026084	si:dkey-43k4.5	6: 21633286 ~ 21678263 (-)
ENSDARG00000039220	st6galnac5a	2: 9160947 ~ 9260002 (-)
ENSDARG00000060085	kcnq3	2: 43001512 ~ 43083755 (-)
ENSDARG00000036483	c1ql3b	2: 3595333 ~ 3597975 (+)
ENSDARG00000038862	kcnb2	2: 30144979 ~ 30177469 (+)
ENSDARG00000069953	kcnq5b	1: 31134942 ~ 31350148 (-)
ENSDARG00000069560	kcnh3	9: 27909927 ~ 28103097 (-)
ENSDARG00000006397	laptm4a	20: 43775793 ~ 43786515 (-)
ENSDARG00000043557	kcnk13b	20: 16703050 ~ 16709138 (+)
ENSDARG00000076789	cx32.2	20: 40724207 ~ 40729364 (-)
ENSDARG00000061288	kcnc4	8: 24928632 ~ 24965308 (-)
ENSDARG00000057433	st6galnac5b	8: 17800380 ~ 17822259 (-)
ENSDARG00000044900	prlhr2a	8: 37905666 ~ 37950194 (+)
ENSDARG00000008212	kcnk13a	17: 16336278 ~ 16342388 (-)
ENSDARG00000018923	fat2	14: 26103330 ~ 26177156 (-)
ENSDARG00000027285	kcnf1b	13: 32993911 ~ 32995365 (-)
ENSDARG00000074530	NA	13: 48224541 ~ 48295723 (-)
ENSDARG00000008140	kcnab1a	18: 34362608 ~ 34536067 (+)
ENSDARG00000061990	kcnh4b	12: 13404784 ~ 13476088 (+)
ENSDARG00000062640	kcnh8	19: 20495249 ~ 20645531 (+)
ENSDARG00000097085	si:ch211-261a10.5	15: 9278992 ~ 9294929 (-)
ENSDARG00000101713	scn2b	15: 12521379 ~ 12545683 (-)
ENSDARG00000086471	pkig	23: 25879320 ~ 25942859 (+)
ENSDARG00000102064	kcna2b	23: 5009964 ~ 5032587 (-)
ENSDARG00000057037	kcnk12l	21: 21357309 ~ 21361287 (+)
ENSDARG00000087247	kcnab2a	11: 41540862 ~ 41699904 (+)
ENSDARG00000036458	prlhr2b	10: 41252525 ~ 41260567 (+)
ENSDARG00000098816	kcnc3b	24: 37080771 ~ 37170289 (+)
ENSDARG00000062942	kcna1a	25: 19954576 ~ 19958278 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE173972 (WT, ezh1+\|+)	embryo	baseline	1.25dpf, Kdrl-positive embryos	NA	NA	NA
GSE173972 (HET, ezh1+\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos	NA	NA	NA
GSE173972 (KO, ezh1-\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA608912 (wt_unjuried)	heart	baseline	5mpf, wild type, uninjured	NA	NA	NA
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury	NA	NA	NA
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury	NA	NA	NA
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured	NA	NA	NA
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	NA	NA	NA
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment	NA	NA	NA
GSE163907 (24hpf)	trunk	baseline	24hpf, trunk tg(sox10:GFP) positive cells	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000026084

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences