Fish Single-cell RNA Database

GENE ID: ENSDARG00000103951

Symbol	Location	Gene type	Genome version	Species
tspan34	1: 57521361 ~ 57533548 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	Epithelial cells (cluster: 15)	potential marker	NA
	GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	Enteroendocrine + ILC3 (cluster: 10)	potential marker	NA
	GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS	Enteroendocrine + ILC3 (cluster: 10) Ionocytes (cluster: 3)	potential marker potential marker	NA NA
	GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS	Enteroendocrine + ILC3 (cluster: 7)	potential marker	NA
	GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS	Enteroendocrine + ILC3 (cluster: 10)	potential marker	NA
	GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA	Enteroendocrine + ILC3 (cluster: 10)	potential marker	NA
	PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
	GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
	PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
	GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
	GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated
	GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated
	GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA
	PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
	GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
	GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
	GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.