Fish Single-cell RNA Database

GENE ID: ENSDARG00000009153

Symbol	Location	Gene type	Genome version	Species
pla2g1b	8: 39724138 ~ 39733667 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000009153 (pla2g1b), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000087017	si:dkey-11k2.7	7: 24366962 ~ 24373662 (-)
ENSDARG00000053010	lpcat2	7: 35385472 ~ 35409027 (-)
ENSDARG00000024503	c6ast3	7: 38642114 ~ 38644560 (-)
ENSDARG00000069463	alox12	7: 26029672 ~ 26047946 (+)
ENSDARG00000035352	pafah1b2	5: 37966505 ~ 37971008 (+)
ENSDARG00000052148	ptgs1	5: 64900223 ~ 64946436 (+)
ENSDARG00000038296	tmem86b	3: 16762483 ~ 16770318 (+)
ENSDARG00000070454	pla2g12a	1: 12061284 ~ 12064799 (-)
ENSDARG00000061451	n4bp2	1: 23372470 ~ 23396454 (+)
ENSDARG00000011257	enpp2	16: 9609721 ~ 9662205 (+)
ENSDARG00000058047	pafah1b3	16: 11773395 ~ 11779661 (-)
ENSDARG00000070786	znf770	20: 10057750 ~ 10065130 (-)
ENSDARG00000091633	si:dkey-177p2.18	20: 27003558 ~ 27012959 (+)
ENSDARG00000003584	pla2g7	20: 35461736 ~ 35471079 (-)
ENSDARG00000010276	ptgs2b	20: 34121818 ~ 34127415 (-)
ENSDARG00000037533	mep1b	20: 6493648 ~ 6516539 (+)
ENSDARG00000056765	ela2l	8: 21366771 ~ 21372485 (-)
ENSDARG00000056744	ela2	8: 21376290 ~ 21381734 (+)
ENSDARG00000009153	pla2g1b	8: 39724138 ~ 39733667 (+)
ENSDARG00000036818	hyal3	8: 26373149 ~ 26381305 (+)
ENSDARG00000042452	p2rx4b	8: 30743263 ~ 30755977 (+)
ENSDARG00000057273	alox5a	13: 18128275 ~ 18174864 (-)
ENSDARG00000061479	thsd7aa	19: 37620342 ~ 37842003 (+)
ENSDARG00000017261	gdpd1	15: 16886196 ~ 16894875 (+)
ENSDARG00000069823	proca1	15: 15445113 ~ 15449929 (-)
ENSDARG00000043085	alox5b.1	15: 942531 ~ 952891 (-)
ENSDARG00000043089	alox5b.2	15: 963292 ~ 976353 (+)
ENSDARG00000029822	cel.2	21: 11385031 ~ 11393979 (+)
ENSDARG00000017490	cel.1	21: 11401247 ~ 11411365 (+)
ENSDARG00000077474	pla2r1	11: 11021396 ~ 11109963 (+)
ENSDARG00000045442	cpb1	24: 4755391 ~ 4765740 (-)
ENSDARG00000043168	cela1.5	22: 7497319 ~ 7508894 (+)
ENSDARG00000060921	pla2g6	22: 29087308 ~ 29130549 (+)
ENSDARG00000103271	pla2g15	25: 13689060 ~ 13703826 (-)
ENSDARG00000030915	cpa1	25: 18448186 ~ 18454016 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	Pancreatic epsilon cells (cluster: 28)	potential marker	NA
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	Pancreas exocrine cells (cluster: 12)	potential marker	NA
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl	Pancreatic cells (cluster: 15)	potential marker	NA
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated	Pancreatic cells (cluster: 6)	potential marker	NA
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS	Pancreatic cells (cluster: 9)	potential marker	NA
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA	Pancreatic cells (cluster: 8)	potential marker	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	Pancreas exocrine cells (cluster: 8)	potential marker	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	Pancreas cells (cluster: 43)	potential marker	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish
GSE151354 (nkx3.2 mutant)	cartilage	growth	21dpf, nkx3.2 mutant
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
GSE130526 (fin)	dorsal and anal fin	baseline	adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
GSE158142 (20hpf)	head	baseline	20hpf, 21-22 somites, untreatment
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment
GSE122680 (2dpf)	retina	baseline	2dpf, WT, untreatment
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA641144 (D_INV)	tumor	disease	adult, ZMEL1-INV cells in vitro individual culture
PRJNA641144 (C_INV)	tumor	disease	adult, ZMEL1-INV cells in vitro co-culture
PRJNA641144 (P_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo primary tumors
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	6dpf, cd41:GFPlow-WT
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

GENE ID: ENSDARG00000009153

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences