GENE ID: ENSDARG00000104162

Symbol Location Gene type Genome version Species
hoxa11a 19: 19737214 ~ 19738923 (+) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000104162 (hoxa11a), yellow represents other genes.
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    • EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. NA NA NA
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. NA NA NA
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry NA NA NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos NA NA NA
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells NA NA NA
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells NA NA NA
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo NA NA NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development NA NA NA
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos NA NA NA
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos NA NA NA
    PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells NA NA NA
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo NA NA NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development NA NA NA
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells NA NA NA
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells NA NA NA
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment NA NA NA
    GSE158142 (24hpf) head baseline 24hpf, untreatment NA NA NA
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment NA NA NA
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver NA NA NA
    GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA NA NA NA
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS NA NA NA
    GSE150498 (DSS treated) intestine disease 6dpf, DSS treated NA NA NA
    GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS NA NA NA
    GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS NA NA NA
    GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated NA NA NA
    GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA NA NA NA
    GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS NA NA NA
    GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated NA NA NA
    GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl NA NA NA
    PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae NA NA NA
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae NA NA NA
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment NA NA NA
    GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells NA NA NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone NA NA NA
    PRJNA641144 (D_INV) tumor disease adult, ZMEL1-INV cells in vitro individual culture NA NA NA
    PRJNA641144 (C_INV) tumor disease adult, ZMEL1-INV cells in vitro co-culture NA NA NA
    PRJNA641144 (P_INV) tumor disease adult, ZMEL1-INV cells in vivo primary tumors NA NA NA
    PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases NA NA NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- NA NA NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells NA NA NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- NA NA NA

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