Fish Single-cell RNA Database

GENE ID: ENSDARG00000102756

Symbol	Location	Gene type	Genome version	Species
nr0b2b	19: 14153486 ~ 14155781 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000102756 (nr0b2b), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000045850	ccdc167	4: 5255041 ~ 5273838 (+)
ENSDARG00000016363	her8a	7: 26429941 ~ 26436480 (-)
ENSDARG00000059812	sin3ab	7: 48345747 ~ 48396195 (-)
ENSDARG00000035558	gps2	5: 24063046 ~ 24074538 (+)
ENSDARG00000035127	rxrab	5: 64476118 ~ 64511428 (-)
ENSDARG00000068194	klf9	5: 26075230 ~ 26078165 (+)
ENSDARG00000039116	nr5a5	3: 53457192 ~ 53465249 (-)
ENSDARG00000067850	jund	2: 56125174 ~ 56131312 (-)
ENSDARG00000099148	bzw1b	9: 426392 ~ 433915 (+)
ENSDARG00000002758	dedd1	16: 10841163 ~ 10863041 (+)
ENSDARG00000030588	slc10a1	20: 28861435 ~ 28867748 (+)
ENSDARG00000016454	esr2a	20: 21583639 ~ 21635659 (+)
ENSDARG00000103176	nr5a1a	8: 52833443 ~ 52871056 (-)
ENSDARG00000042396	odf3b	18: 7611298 ~ 7622892 (+)
ENSDARG00000057741	nr1h4	18: 15644559 ~ 15666942 (+)
ENSDARG00000102756	nr0b2b	19: 14153486 ~ 14155781 (-)
ENSDARG00000021494	hnf4a	23: 25832689 ~ 25865856 (+)
ENSDARG00000031161	nr1d4a	23: 35795759 ~ 35821521 (-)
ENSDARG00000060980	atp8b1	21: 3618519 ~ 3700334 (-)
ENSDARG00000023362	nr5a1b	21: 8276989 ~ 8317588 (+)
ENSDARG00000070078	abcb11b	11: 13223625 ~ 13272085 (+)
ENSDARG00000059370	nr1d4b	11: 1944729 ~ 1967438 (-)
ENSDARG00000002060	brf2	10: 41279007 ~ 41302909 (-)
ENSDARG00000045306	slc51a	24: 24961899 ~ 24983047 (-)
ENSDARG00000100940	nr5a2	22: 22634007 ~ 22719440 (-)
ENSDARG00000061368	klf13	25: 34487700 ~ 34512102 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment	NA	NA	NA
GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment	NA	NA	NA
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment	NA	NA	NA
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment	NA	NA	NA
GSE158142 (20hpf)	head	baseline	20hpf, 21-22 somites, untreatment	NA	NA	NA
GSE158142 (24hpf)	head	baseline	24hpf, untreatment	NA	NA	NA
GSE158142 (3dpf)	head	baseline	3dpf, untreatment	NA	NA	NA
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	NA	NA	NA
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS	NA	NA	NA
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC	NA	NA	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	NA	NA	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	NA	NA	NA
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells	NA	NA	NA
PRJNA641144 (M_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vivo metastases	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000102756

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences