Fish Single-cell RNA Database

GENE ID: ENSDARG00000015068

Symbol	Location	Gene type	Genome version	Species
txk	23: 44049509 ~ 44060455 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000015068 (txk), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000088167	si:ch211-112g6.4	7: 29293452 ~ 29298477 (+)
ENSDARG00000100389	nitr11a	7: 17295053 ~ 17297156 (-)
ENSDARG00000035558	gps2	5: 24063046 ~ 24074538 (+)
ENSDARG00000096280	ighz	3: 33994684 ~ 33997763 (-)
ENSDARG00000078975	igl1c3	3: 58833306 ~ 58835177 (+)
ENSDARG00000093689	FP016018.1	3: 58656312 ~ 58656994 (+)
ENSDARG00000044457	gfi1ab	6: 29004062 ~ 29007493 (-)
ENSDARG00000057497	stk35l	6: 38845676 ~ 38861349 (+)
ENSDARG00000087496	tradv30.0.6	2: 36597322 ~ 36597793 (-)
ENSDARG00000103978	sh3bp5b	16: 36126310 ~ 36163508 (+)
ENSDARG00000078611	lrriq3	8: 17987215 ~ 17990577 (+)
ENSDARG00000019845	pdlim1	13: 25762908 ~ 25774183 (-)
ENSDARG00000089983	si:ch73-109i22.2	19: 11214007 ~ 11230837 (+)
ENSDARG00000100529	sh3bp5a	19: 1964005 ~ 1999477 (+)
ENSDARG00000015068	txk	23: 44049509 ~ 44060455 (+)
ENSDARG00000036840	krt15	11: 11515778 ~ 11518469 (-)
ENSDARG00000089564	NA	11: 22109887 ~ 22169026 (+)
ENSDARG00000007531	zcchc9	10: 42898103 ~ 42903716 (+)
ENSDARG00000111761	igl3v4	24: 38197852 ~ 38198344 (+)
ENSDARG00000093855	igl3v2	24: 38201089 ~ 38201564 (+)
ENSDARG00000110046	igl3v1	24: 38205798 ~ 38206291 (+)
ENSDARG00000097228	si:dkey-234i14.12	25: 37290206 ~ 37290726 (+)
ENSDARG00000074062	si:dkey-234i14.15	25: 37305086 ~ 37305738 (-)
ENSDARG00000079843	igl4v8	25: 37289088 ~ 37317174 (+)
ENSDARG00000077452	si:dkey-234i14.14	25: 37299390 ~ 37300132 (+)
ENSDARG00000019591	igl4v9	25: 37318550 ~ 37319117 (-)
ENSDARG00000051760	igl4v10	25: 37320928 ~ 37322081 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood	NA	NA	NA
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated	NA	NA	NA
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS	NA	NA	NA
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS	NA	NA	NA
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA	NA	NA	NA
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC	NA	NA	NA
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC	NA	NA	NA
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	6dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (WT)	whole body	baseline	10dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000015068

EXPRESSION

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