Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
cckb | KN150698.1: 2793 ~ 8412 (+) | protein_coding | GRCz11 | Danio rerio |
Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
---|---|---|---|---|---|---|---|
PRJNA554650 (6.5dpf) | brain | baseline | 6.5dpf, whole brain of nr1d1:VNP fish |
Dorsal habenula (cluster: 9) |
potential marker |
NA |
|
GSE168695 (5dpf) | embryo | baseline | 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos |
Skin (cluster: 10) |
potential marker |
NA |
|
PRJNA564810 (5dpf) | embryo | baseline | 5dpf, a single-cell transcriptome atlas for zebrafish development |
Epidermal cells (cluster: 9) |
potential marker |
NA |
|
PRJNA564810 (2dpf) | embryo | baseline | 2dpf, a single-cell transcriptome atlas for zebrafish development |
Epidermal cells (cluster: 16) Skeletal muscle cells (cluster: 17) |
potential marker potential marker |
NA NA |
|
PRJNA564810 (1dpf) | embryo | baseline | 1dpf, a single-cell transcriptome atlas for zebrafish development |
Skeletal muscle cells (cluster: 15) Skeletal muscle cells (cluster: 19) |
potential marker potential marker |
NA NA |
|
GSE150498 (nod2-|-, untreated) | intestine | disease | 6dpf, nod2-/-, untreated |
Corpuscles of stannius (cluster: 8) |
potential marker |
NA |
|
PRJNA605021 (supporting cells) | neuromast | baseline | 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae |
Epidermal cells (cluster: 1) Support cells (cluster: 3) |
potential marker potential marker |
NA NA |
|
PRJNA605021 (hair cells) | neuromast | baseline | 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae |
Epidermal cells (cluster: 2) |
potential marker |
NA |
|
PRJNA668529 (3d) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 days |
Basal cells (cluster: 2) |
potential marker |
NA |
|
PRJNA668529 (control) | olfactory rosette | baseline | 3mpf, intranasal PBS |
Basal cells (cluster: 6) |
potential marker |
NA |
|
GSE131136 (all) | trunk, skin | baseline | 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone | ||||
GSE176129 (pdgfrb-positive) | whole body | baseline | 5dpf, FACS-isolated pdgfrb-positive cells |
Epidermal cells (cluster: 14) Epidermal cells (cluster: 29) |
potential marker potential marker |
NA NA |
|
PRJNA415636 (brain) | brain | baseline | adult, Zebrabow M, brain | ||||
GSE151354 (wild type) | cartilage | baseline | 21dpf, wild type | ||||
GSE151354 (nkx3.2 mutant) | cartilage | growth | 21dpf, nkx3.2 mutant | ||||
PRJNA610520 (3.5dpf) | caudal hematopoietic tissue | baseline | 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. | ||||
PRJNA610520 (4.5dpf) | caudal hematopoietic tissue | baseline | 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. | ||||
PRJNA656271 (1.5dpf) | embryo | baseline | 1.5dpf, FACS-isolated EGFP+ cells | ||||
PRJNA640816 (2dpf) | embryo | baseline | 2dpf, FACS isolated -4.9sox10:EGFP+ cells | ||||
PRJNA640816 (2.9dpf) | embryo | baseline | 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells | ||||
PRJNA706197 (24hpf) | embryo | baseline | 24hpf, FACS sorted sox10:nEOS cells | ||||
PRJNA706197 (1.25dpf) | embryo | baseline | 1.25dpf, FACS sorted sox10:nEOS cells | ||||
PRJNA706197 (18hpf) | embryo | baseline | 18hpf, FACS sorted sox10:nEOS cells | ||||
PRJNA608912 (wt_14dpi) | heart | regeneration | 5mpf, wild type, 14 days post injury | ||||
PRJNA754013 (zebrafish) | hypothalamus | baseline | adult, male, female, untreatment | ||||
GSE150498 (wildtype, untreated) | intestine | baseline | 6dpf, wildtype, untreated | ||||
GSE150498 (wildtype, 1X DSS) | intestine | disease | 6dpf, wildtype, 1X DSS | ||||
GSE150498 (nod2-|-, 1X DSS) | intestine | disease | 6dpf, nod2-/-, 1X DSS | ||||
GSE150498 (wildtype, 2X DSS) | intestine | disease | 6dpf, wildtype, 2X DSS | ||||
GSE150498 (wildtype, 2X DSS+BZA) | intestine | disease | 6dpf, wildtype, 2X DSS+BZA | ||||
GSE150498 (nod2-|-, 2X DSS) | intestine | disease | 6dpf, nod2-/-, 2X DSS | ||||
GSE150498 (nod2-|-, 2X DSS+BZA) | intestine | disease | 6dpf, nod2-/-, 2X DSS+BZA | ||||
GSE123241 (wild type) | neuromast | baseline | 5dpf, wild type during sensory hair cell regeneration, lateral line sensory | ||||
PRJNA668529 (3h) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 hours | ||||
PRJNA415636 (primary pancreatic islet) | primary pancreatic islet | baseline | adult, Zebrabow M, primary pancreatic islet | ||||
GSE122680 (1.5dpf) | retina | baseline | 1.5dpf, WT, untreatment | ||||
PRJNA672101 (nrl-KO) | retina | growth | 5mpf, three retinas from nrl-KO zebrafsih | ||||
PRJNA672101 (WT) | retina | baseline | 5mpf, three retinas from WT zebrafsih | ||||
GSE152982 (wild type) | trunk | baseline | 1.25dpf, untreatment |