Gene
RNA
| Item | Value |
|---|---|
| gene id | G240221 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 5622817 ~ 5623356 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU272582 | False | 505 | lncRNA | 0.37 | 1 | 5622817 | 5623321 |
| TU272583 | True | 540 | lncRNA | 0.36 | 1 | 5622817 | 5623356 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000055_05614889_05616453 | NA | coding | upstream | 5356 | 5614065 ~ 5617591 (+) |
| CI01000055_05608414_05611862 | CAV2 | coding | upstream | 9343 | 5607506 ~ 5613775 (+) |
| CI01000055_05565166_05572215 | TES | coding | upstream | 50360 | 5565166 ~ 5572457 (+) |
| CI01000055_05517350_05524400 | NA | coding | upstream | 98197 | 5517350 ~ 5524620 (+) |
| CI01000055_05263543_05300250 | TMTC3 | coding | upstream | 322168 | 5263247 ~ 5300649 (+) |
| CI01000055_05630944_05688603 | MET | coding | downstream | 7588 | 5630944 ~ 5688603 (+) |
| CI01000055_05693578_05697926 | FAM185A | coding | downstream | 70158 | 5693514 ~ 5698294 (+) |
| CI01000055_05728910_05733815 | ARMC10 | coding | downstream | 105554 | 5728910 ~ 5734420 (+) |
| CI01000055_05737650_05746790 | CAX2 | coding | downstream | 114294 | 5737650 ~ 5747046 (+) |
| CI01000055_05778957_05783896 | TDG.2 | coding | downstream | 155601 | 5778957 ~ 5784241 (+) |
| G240255 | NA | non-coding | upstream | 58881 | 5563139 ~ 5563936 (+) |
| G240254 | NA | non-coding | upstream | 64986 | 5557617 ~ 5557831 (+) |
| G240252 | NA | non-coding | upstream | 66141 | 5555646 ~ 5556676 (+) |
| G240251 | NA | non-coding | upstream | 70069 | 5551169 ~ 5552748 (+) |
| G240286 | NA | non-coding | downstream | 129600 | 5752956 ~ 5753173 (+) |
| G240290 | NA | non-coding | downstream | 146096 | 5769452 ~ 5769880 (+) |
| G240378 | NA | non-coding | downstream | 210482 | 5833838 ~ 5836305 (+) |
| G240361 | NA | non-coding | downstream | 239139 | 5862495 ~ 5866774 (+) |
| G240323 | NA | non-coding | downstream | 284462 | 5907818 ~ 5962996 (+) |
| G240099 | NA | other | upstream | 79005 | 5525472 ~ 5544153 (+) |
| CI01000055_05163240_05166231 | PIGY, PYURF | other | upstream | 456170 | 5162990 ~ 5166647 (+) |
| CI01000055_04265119_04272728 | NA | other | upstream | 1350102 | 4265119 ~ 4273913 (+) |
| G239755 | NA | other | upstream | 1367725 | 4254210 ~ 4255092 (+) |
| CI01000055_06087070_06088629 | ETFRF1, LYRM5, LYRM5B | other | downstream | 463469 | 6087034 ~ 6088759 (+) |
| G240344 | NA | other | downstream | 540504 | 6163860 ~ 6164011 (+) |
| CI01000055_06310117_06334586 | GRAMD4B, GRAMD4 | other | downstream | 710968 | 6310117 ~ 6334801 (+) |
