G242963


Basic Information

Item Value
gene id G242963
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000056
NCBI id null
chromosome length 2086016
location 1658266 ~ 1658746 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU275756
GCGTTTAGAAACAAAATTTATGAGACAGTTGTTGTCAGATTTCATTGATGAAATTTAATCGAAAGCTTGGCAGCTTTGGAGAATTATATATATATATATATATATAAATATCTAACATCATTTATTCACTCAGGTATCAAATCTTTTTCCGGTAAATTTGGTCATTTTATAATTTTGTGTCTCTGAGTCACACCGGATTTGCCGTAAACAGGCCTTTGCACACTGAAATGCTATCACTTTCTGTTAATCTTCTTCAGCACACAAAGCTCTGCAGTTTTCTGGGTCACGGTACCTTGTGACCCAGTTCTCCCTATGGAACTTTTCTAAATGATAAACTGCATTTGACAGTCATCTACATGAAAGATCACTGTTTAGCATAACGCCAGATCATGACGCCAGACCCTTTAAACAGCCGAAACAGGACAGTGTGTCACCTGCCATAGGTCACGTTATTCACCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU275756 True 460 lncRNA 0.38 2 1658266 1658746

Neighbor

gene id symbol gene type direction distance location
CI01000056_01306290_01314471 NA coding upstream 343640 1305876 ~ 1314626 (+)
CI01000056_01059066_01060580 NA coding upstream 597652 1058889 ~ 1062844 (+)
CI01000056_00601216_00610322 TBL1XR1.S, TBL1XR1A, TBL1XR1, TBL1XR1.L coding upstream 1047861 600353 ~ 610405 (+)
CI01000056_00376962_00378136 ARPC4 coding upstream 1279758 376962 ~ 378508 (+)
CI01000056_00349501_00362980 RAB7A, RAB7 coding upstream 1295286 349501 ~ 362980 (+)
CI01000056_01714213_01714936 NA coding downstream 55196 1713942 ~ 1714975 (+)
CI01000056_01720495_01737951 RBMS1A coding downstream 61749 1720495 ~ 1738749 (+)
CI01000056_01749027_01767554 ITGB6 coding downstream 90130 1748876 ~ 1767853 (+)
CI01000056_01780748_01797031 NA coding downstream 122002 1780748 ~ 1797042 (+)
CI01000056_01804273_01835065 LY75 coding downstream 145458 1804204 ~ 1835717 (+)
G242953 NA non-coding upstream 40487 1617548 ~ 1617779 (+)
G242952 NA non-coding upstream 41044 1616957 ~ 1617222 (+)
G242913 NA non-coding upstream 44165 1613732 ~ 1614101 (+)
G242949 NA non-coding upstream 47838 1610175 ~ 1610428 (+)
G242948 NA non-coding upstream 48399 1609579 ~ 1609867 (+)
G242965 NA non-coding downstream 10852 1669598 ~ 1669801 (+)
G242967 NA non-coding downstream 12593 1671339 ~ 1671704 (+)
G242969 NA non-coding downstream 14527 1673273 ~ 1673488 (+)
G242970 NA non-coding downstream 14746 1673492 ~ 1673723 (+)
G242946 NA non-coding downstream 21116 1679862 ~ 1685901 (+)
G241982 NA other upstream 1497316 155068 ~ 160950 (+)

Expression


Co-expression Network