CI01000057_00415376_00415786


Basic Information

Item Value
gene id CI01000057_00415376_00415786
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 415376 ~ 415938 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_00415376_00415786.mRNA
CTGCAGATGAAGACAGAAAACCATGAGGAAAGTGGCCTTGAAATTGAGAAGAGCTGCTGCAGTAATGCTGCTATCTCTCTGTGCAGAGCGAGTCTGATTTGCACTGGCTGCAGCTCCTCTATTTATACTCCCAAATCTCCATATGAATGTGTGAGGATTGAGCTTGTTGGAGTTTCTCACAGTTTGGAGCCAATGGAAGAGCTCAAACAGACAATGAGGGATGTGGGCAGCCACATGCTCGATGATCCTCTATCAGGAGCTCAAAGCCCGTGTCTCAGGGGAGAATCTGGGAAAGTCCTGACCTTGTGTTCACATTAATGTCACTTTATGAACACACACCCATCATAACCAAACACGTGCCAAGATTTCATTTTCTCTAATGTTAGAACAACAATAACACAGTGTTATCAACCATAAAAATGTGCAATGCACACTGAATTTTTAAAAAATAATTTATTTGTAATCAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_00415376_00415786.mRNA True 470 mRNA 0.42 2 415376 415938

Neighbor

gene id symbol gene type direction distance location
CI01000057_00413724_00414032 NA coding upstream 1087 413614 ~ 414289 (+)
CI01000057_00407250_00407817 NA coding upstream 7160 407170 ~ 408216 (+)
CI01000057_00388747_00398161 ALDH4A1 coding upstream 16557 388306 ~ 398819 (+)
CI01000057_00346063_00377661 IFFO2, IFFO2B coding upstream 36976 345320 ~ 378400 (+)
CI01000057_00335633_00339359 AKR7A3 coding upstream 75879 334007 ~ 339497 (+)
CI01000057_00417827_00418207 NA coding downstream 1762 417700 ~ 418655 (+)
CI01000057_00422727_00428274 NA coding downstream 6500 422438 ~ 428281 (+)
CI01000057_00435808_00442819 NA coding downstream 19358 435296 ~ 442838 (+)
CI01000057_00452440_00452721 NA coding downstream 36425 452363 ~ 454003 (+)
CI01000057_00457954_00458159 NA coding downstream 42016 457954 ~ 459865 (+)
G243415 NA non-coding upstream 10707 400191 ~ 404669 (+)
G243411 NA non-coding upstream 214698 194141 ~ 200678 (+)
CI01000057_00187004_00188981 NA non-coding upstream 221660 186007 ~ 191434 (+)
G243422 NA non-coding upstream 253268 94117 ~ 162108 (+)
G243477 NA non-coding downstream 4898 420836 ~ 421940 (+)
CI01000057_00485167_00494040 NA non-coding downstream 68241 484167 ~ 494565 (+)
G243434 NA non-coding downstream 80806 496744 ~ 497326 (+)
G243509 NA non-coding downstream 146874 562812 ~ 563039 (+)
G243514 NA non-coding downstream 154592 570530 ~ 570908 (+)
G243557 NA other downstream 538905 954843 ~ 955195 (+)
G243558 NA other downstream 540125 956063 ~ 958371 (+)
CI01000057_02395285_02396439 NA other downstream 1978660 2394598 ~ 2396561 (+)
G243975 NA other downstream 2160515 2576453 ~ 2576852 (+)

Expression


Co-expression Network