RNA id: CI01000057_00415376_00415786.mRNA



Basic Information


Item Value
RNA id CI01000057_00415376_00415786.mRNA
length 470
RNA type mRNA
GC content 0.42
exon number 2
gene id CI01000057_00415376_00415786
representative True

Chromosome Information


Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 415376 ~ 415938 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTGCAGATGAAGACAGAAAACCATGAGGAAAGTGGCCTTGAAATTGAGAAGAGCTGCTGCAGTAATGCTGCTATCTCTCTGTGCAGAGCGAGTCTGATTTGCACTGGCTGCAGCTCCTCTATTTATACTCCCAAATCTCCATATGAATGTGTGAGGATTGAGCTTGTTGGAGTTTCTCACAGTTTGGAGCCAATGGAAGAGCTCAAACAGACAATGAGGGATGTGGGCAGCCACATGCTCGATGATCCTCTATCAGGAGCTCAAAGCCCGTGTCTCAGGGGAGAATCTGGGAAAGTCCTGACCTTGTGTTCACATTAATGTCACTTTATGAACACACACCCATCATAACCAAACACGTGCCAAGATTTCATTTTCTCTAATGTTAGAACAACAATAACACAGTGTTATCAACCATAAAAATGTGCAATGCACACTGAATTTTTAAAAAATAATTTATTTGTAATCAGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU276246 lncRNA upstream 10707 400191 ~ 404669 (+) True G243415
TU276242 lncRNA upstream 214698 194141 ~ 200678 (+) True G243411
TU276256 lncRNA upstream 221660 191457 ~ 193716 (+) True G243425
TU276253 lncRNA upstream 253268 94117 ~ 162108 (+) True G243422
TU276326 lncRNA downstream 4898 420836 ~ 420958 (+) True G243477
TU276328 lncRNA downstream 4898 420836 ~ 421940 (+) False G243477
TU276332 lncRNA downstream 4898 420836 ~ 420958 (+) False G243477
TU276333 lncRNA downstream 4898 420836 ~ 420958 (+) True G243477
TU276327 lncRNA downstream 10299 458421 ~ 459865 (+) True CI01000057_00457954_00458159
CI01000057_00413724_00414032.mRNA mRNA upstream 1087 413614 ~ 414289 (+) True CI01000057_00413724_00414032
CI01000057_00407250_00407817.mRNA mRNA upstream 7160 407170 ~ 408216 (+) True CI01000057_00407250_00407817
CI01000057_00388747_00398161.mRNA mRNA upstream 16557 388306 ~ 398819 (+) True CI01000057_00388747_00398161
CI01000057_00346063_00377661.mRNA mRNA upstream 36976 345320 ~ 378400 (+) True CI01000057_00346063_00377661
CI01000057_00335633_00339359.mRNA mRNA upstream 75879 334007 ~ 339497 (+) True CI01000057_00335633_00339359
CI01000057_00417827_00418207.mRNA mRNA downstream 1762 417700 ~ 418655 (+) False CI01000057_00417827_00418207
CI01000057_00422727_00428274.mRNA mRNA downstream 6500 422438 ~ 428281 (+) False CI01000057_00422727_00428274
CI01000057_00435808_00442819.mRNA mRNA downstream 19358 435296 ~ 442838 (+) True CI01000057_00435808_00442819
CI01000057_00452440_00452721.mRNA mRNA downstream 36425 452363 ~ 453165 (+) False CI01000057_00452440_00452721
CI01000057_00457954_00458159.mRNA mRNA downstream 42016 457954 ~ 458814 (+) False CI01000057_00457954_00458159
TU276323 other downstream 1801 420156 ~ 420510 (+) True G243476
TU276324 other downstream 1801 417739 ~ 418631 (+) True CI01000057_00417827_00418207
TU276419 other downstream 538905 954843 ~ 955195 (+) True G243557
TU276421 other downstream 540125 956063 ~ 958371 (+) True G243558
TU276844 other downstream 1978660 2394598 ~ 2396482 (+) True CI01000057_02395285_02396439

Expression Profile