G260612


Basic Information

Item Value
gene id G260612
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 3239314 ~ 3239778 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU295814
GTAAACTACGGTTCNNNNNNNNNNNNTGGTAAGATTTTTGAATGAAAGTAGTCTCTTTTGCTCACCAAGGCTGTGTTTACTGAATGAAACATACAGTAAAAATAGTAACATTATGAAATATTATTACAATTTGAATAACTTTTCTATTTTAATATATTTTAAAATGGAATCTATTTATGTGATGGTAAATATTTTTGCTGCTTAATATTTTTGTGGAATATGAGATACATATTTTTCAGGATTCTCGCAGGTCTCACATGTGTATTTTAATTTTTTTTTTGCAGTAATTAGTTTATCCACAAGTTGGCAACCGTGCCCTGGGGGTGTTGATTCACAAGGTAGTTGAAGAAAACCAGCATAAACAGAACAGACCGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU295814 True 377 lncRNA 0.30 2 3239314 3239778

Neighbor

gene id symbol gene type direction distance location
CI01000062_03059551_03060037 NA coding upstream 179112 3059464 ~ 3060202 (+)
CI01000062_02884548_02919912 NA coding upstream 319039 2883254 ~ 2920275 (+)
CI01000062_02804022_02857974 NA coding upstream 381287 2801162 ~ 2858027 (+)
CI01000062_02663074_02721051 KIDINS220B, KIDINS220, KIDINS220A coding upstream 516809 2663074 ~ 2722505 (+)
CI01000062_02613774_02651046 MBOAT2, MBOAT2A coding upstream 587760 2613774 ~ 2651554 (+)
CI01000062_03308286_03311512 DNAL1 coding downstream 68508 3308286 ~ 3312432 (+)
CI01000062_03313225_03326549 NA coding downstream 72416 3312194 ~ 3326725 (+)
CI01000062_03422781_03423731 TMEM121A, TMEM121B, TMEM121 coding downstream 182128 3421906 ~ 3424749 (+)
CI01000062_03480918_03482967 CCDC28A coding downstream 241140 3480918 ~ 3484109 (+)
CI01000062_03487108_03498318 ECT2L coding downstream 247330 3487108 ~ 3498881 (+)
G260595 NA non-coding upstream 24715 3213568 ~ 3214599 (+)
G260592 NA non-coding upstream 31432 3207575 ~ 3207882 (+)
G260582 NA non-coding upstream 52890 3186219 ~ 3186424 (+)
G260581 NA non-coding upstream 53206 3185883 ~ 3186108 (+)
G260572 NA non-coding upstream 78217 3160105 ~ 3161097 (+)
G260661 NA non-coding downstream 90008 3329786 ~ 3331059 (+)
G260669 NA non-coding downstream 105568 3345346 ~ 3345596 (+)
G260673 NA non-coding downstream 113460 3353238 ~ 3353444 (+)
G260719 NA non-coding downstream 139596 3379374 ~ 3379756 (+)
G260720 NA non-coding downstream 140017 3379795 ~ 3380764 (+)
CI01000062_03904672_03920716 NA other downstream 664733 3903987 ~ 3920753 (+)

Expression


Co-expression Network