XLOC_010546 (si:dkey-237j11.3)


Basic Information

Item Value
gene id XLOC_010546
gene name si:dkey-237j11.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 14528374 ~ 14552199 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020681
GATTGAATACTTTTCATCATATgATACTAAAGATGCTGTCATTGATGGTCATCTTGGCTCTCACACTTCACACTGGTCTGTGTGAGCTGGACATGCAGCACCCAAATATGCCCTGCACTCCAGCAAAAAATGTGAATGCTTACAACTCTTTTCTCAAAAAACACATTCGTGACGACCTTCCCACTGATCTGAAGAAAGACAACTGGAAAAAGTTCATCAACAGAATTGACACCTGGGACAGGCCAGTTCAGTCCTTTTTCCCtttgagtttaaaaaataatttgacaaATGTGTGTTCATCAGGAGGAAAGATGTACCAGGGCAACCTCTGCATCAGCAAGACACCCTTTTCCTTCATCACAGTGAAGATCGACTGTGCGACTAAAACAATCAAAAGAGTGGAACGTCGTGAGAACTATGTTATTCTTGCATGTGATAGATTTGGCAACAAATGCCTCCCTGACCACTTTGAAGCAAACACCAAAAACATTCAACCAAATACCAAAAAGCCGAACTGCAATAAATCCTGGCTTGTGTCTGTTTATGAGGAAGCATTTGCCTGGCTGTGATGTACTAAAATATTAACcagcaaaacaattttttttttttttcagaatcacTGTATTGTTTTTTAGCAACATCTATaatgccaacccaggctcattctgaaaacgcagtgccgtggacgtttctggagaccgcaaaatacatcccgggag
>TCONS_00020682
ACAACACAGCAGGTGACTGTGTCCGTCTCTGTTTAATTTTGTTAGACTTGTAATCGGTCCCCGTTCTTTTCTTctttgaagttttatttttttccatttgtatTACTAAGGGATCCGAAACCACCTCGTCGCCACTGTTATGTTTTTTGTTCTCAAGGAACGATGCAGACAACCATTTAGTGGTGAATGTGACATTCTGCTGAAATACACTTCCTGATACTAAAGATGCTGTCATTGATGGTCATCTTGGCTCTCACACTTCACACTGGTCTGTGTGAGCTGGACATGCAGCACCCAAATATGCCCTGCACTCCAGCAAAAAATGTGAATGCTTACAACTCTTTTCTCAAAAAACACATTCGTGACGACCTTCCCACTGATCTGAAGAAAGACAACTGGAAAAAGTTCATCAACAGAATTGACACCTGGGACAGGCCAGTTCAGTCCTTTTTCCCtttgagtttaaaaaataatttgacaaATGTGTGTTCATCAGGAGGAAAGATGTACCAGGGCAACCTCTGCATCAGCAAGACACCCTTTTCCTTCATCACAGTGAAGATCGACTGTGCGACTAAAACAATCAAAAGAGTGGAACGTCGTGAGAACTATGTTATTCTTGCATGTGATAGATTTGGCAACAAATGCCTCCCTGACCACTTTGAAGCAAACACCAAAAACATTCAACCAAATACCAAAAAGCCGAACTGCAATAAATCCTGGCTTGTGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094303

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020681 False 719 mRNA 0.41 2 14528374 14534724
TCONS_00020682 True 730 mRNA 0.41 2 14528556 14552199

Neighbor

gene id symbol gene type direction distance location
XLOC_010545 BX324006.2 coding downstream 84985 14421800 ~ 14443389 (-)
XLOC_010544 NA coding downstream 110967 14416346 ~ 14417407 (-)
XLOC_010543 crabp2a coding downstream 131371 14383479 ~ 14397003 (-)
XLOC_010542 itga10 coding downstream 174807 14276364 ~ 14353567 (-)
XLOC_010541 rnf115 coding downstream 279482 14231406 ~ 14248892 (-)
XLOC_010547 dscc1 coding upstream 19809 14572008 ~ 14587332 (-)
XLOC_010548 mrpl13 coding upstream 500314 15052513 ~ 15097513 (-)
XLOC_010549 sntb1 coding upstream 612784 15164983 ~ 15263099 (-)
XLOC_010550 has2 coding upstream 817435 15369634 ~ 15387459 (-)
XLOC_010551 CT573793.2 coding upstream 1156005 15708204 ~ 15709144 (-)
XLOC_010626 CR392024.2 misc upstream 6342913 20895112 ~ 20895175 (-)
XLOC_010540 BX322530.1 non-coding downstream 360701 14093781 ~ 14167673 (-)
XLOC_010539 NA non-coding downstream 437672 14088331 ~ 14090702 (-)
XLOC_010536 NA non-coding downstream 522765 13976380 ~ 14005609 (-)
XLOC_010552 CT573793.3 non-coding upstream 1226960 15779159 ~ 15780407 (-)
XLOC_010553 NA non-coding upstream 1234038 15786237 ~ 15786804 (-)
XLOC_010554 CT573799.2 non-coding upstream 1261307 15813506 ~ 15814501 (-)
XLOC_010562 NA non-coding upstream 1714357 16266556 ~ 16270435 (-)

Expression


Co-expression Network