XLOC_010552 (CT573793.3)


Basic Information

Item Value
gene id XLOC_010552
gene name CT573793.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 15779159 ~ 15780407 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020688
AGAAATCATTTATTGCTGCGGCCGGACAGCAAACTACTCTTTGGCAGGTACATTAAGAAAATGGGCAAAACATGAGTCCTAACATTAGTGGAATGGAGGGAGGAACCATCGACCTATGACATTATTGTTTCTAAAAAGAACCTACTGAAAAAGAAATTTGAACCTGGGGATGTTGTGGATGTTGCCTATGAGGATGAAAGTTCACCAGCCATAGTTTTAGACATTAAAGAGAACAAAGAAACTCTCAGGAGGAGGATATTCAGAAGAGGGGAATTTACAGACGTAGTACAGAAGAAGTTTCCAAACGTACCAATAAAATGTATCAGAGCAGCAGTAAGGGAAAAAGTAAATGATGAGCACAAGTTACAAGTAAGgaaaatggaGTAAACACAGCCTGTTCATTGGATTCTggtctactttttatttttattttttttaacaattttaataaataatttgtga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104445

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020688 True 462 lncRNA 0.36 4 15779159 15780407

Neighbor

gene id symbol gene type direction distance location
XLOC_010551 CT573793.2 coding downstream 70015 15708204 ~ 15709144 (-)
XLOC_010550 has2 coding downstream 391700 15369634 ~ 15387459 (-)
XLOC_010549 sntb1 coding downstream 516060 15164983 ~ 15263099 (-)
XLOC_010548 mrpl13 coding downstream 681646 15052513 ~ 15097513 (-)
XLOC_010547 dscc1 coding downstream 1191827 14572008 ~ 14587332 (-)
XLOC_010553 NA coding upstream 5830 15786237 ~ 15786804 (-)
XLOC_010554 CT573799.2 coding upstream 33099 15813506 ~ 15814501 (-)
XLOC_010555 UBE2O coding upstream 162480 15942887 ~ 15988320 (-)
XLOC_010556 ankib1b coding upstream 261236 16041643 ~ 16120941 (-)
XLOC_010557 fabp11b coding upstream 368354 16148761 ~ 16152199 (-)
XLOC_010626 CR392024.2 misc upstream 5114705 20895112 ~ 20895175 (-)
XLOC_010545 BX324006.2 non-coding downstream 1335770 14421800 ~ 14443389 (-)
XLOC_010544 NA non-coding downstream 1361752 14416346 ~ 14417407 (-)
XLOC_010540 BX322530.1 non-coding downstream 1611486 14093781 ~ 14167673 (-)
XLOC_010539 NA non-coding downstream 1688457 14088331 ~ 14090702 (-)
XLOC_010562 NA non-coding upstream 486149 16266556 ~ 16270435 (-)
XLOC_010565 CR848667.2 non-coding upstream 746568 16526975 ~ 16529972 (-)
XLOC_010567 CR848667.3 non-coding upstream 793007 16573414 ~ 16573530 (-)

Expression


Co-expression Network