Gene
RNA
| Item | Value |
|---|---|
| gene id | G329190 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000112 |
| NCBI id | null |
| chromosome length | 5247617 |
| location | 2917949 ~ 2918168 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU374172 | True | 220 | lncRNA | 0.41 | 1 | 2917949 | 2918168 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000112_02774549_02777028 | SOCS3, SOCS3A | coding | upstream | 139318 | 2773456 ~ 2778631 (+) |
| CI01000112_02740099_02758394 | CYTH1, CYTH1A, CYH1 | coding | upstream | 159555 | 2740099 ~ 2758394 (+) |
| CI01000112_02659891_02661832 | NA | coding | upstream | 255934 | 2659891 ~ 2662015 (+) |
| CI01000112_02585528_02607525 | USP36 | coding | upstream | 310281 | 2584929 ~ 2607668 (+) |
| CI01000112_02565726_02573879 | TIMP2B | coding | upstream | 343843 | 2565508 ~ 2574106 (+) |
| CI01000112_02992698_02995752 | NA | coding | downstream | 71653 | 2989821 ~ 2996663 (+) |
| CI01000112_03085161_03094204 | HID1 | coding | downstream | 166993 | 3085161 ~ 3094406 (+) |
| CI01000112_03100235_03105799 | USH1G, USH1GA | coding | downstream | 181280 | 3099448 ~ 3106273 (+) |
| CI01000112_03112349_03117520 | NA | coding | downstream | 194181 | 3112349 ~ 3117587 (+) |
| CI01000112_03192658_03204707 | MHC1ZBA | coding | downstream | 273493 | 3191661 ~ 3205032 (+) |
| G329184 | NA | non-coding | upstream | 16547 | 2901186 ~ 2901402 (+) |
| G329101 | NA | non-coding | upstream | 49220 | 2863085 ~ 2868729 (+) |
| G329153 | NA | non-coding | upstream | 129092 | 2788427 ~ 2788857 (+) |
| G329151 | NA | non-coding | upstream | 132680 | 2785040 ~ 2785269 (+) |
| G329145 | NA | non-coding | upstream | 145208 | 2772501 ~ 2772741 (+) |
| G329192 | NA | non-coding | downstream | 9256 | 2927424 ~ 2930886 (+) |
| G329197 | NA | non-coding | downstream | 28174 | 2946342 ~ 2949164 (+) |
| G329195 | NA | non-coding | downstream | 108849 | 3027017 ~ 3048993 (+) |
| G329276 | NA | non-coding | downstream | 149663 | 3067831 ~ 3072729 (+) |
| G329277 | NA | non-coding | downstream | 179752 | 3097920 ~ 3098296 (+) |
| G329125 | NA | other | upstream | 299798 | 2617704 ~ 2618151 (+) |
| G328456 | NA | other | upstream | 1684831 | 1232022 ~ 1233118 (+) |
| G329194 | NA | other | downstream | 2086 | 2920254 ~ 2931889 (+) |
| CI01000112_05076817_05101845 | NA | other | downstream | 2166552 | 5076817 ~ 5101845 (+) |
