XLOC_001192 (tmem144a)


Basic Information

Item Value
gene id XLOC_001192
gene name tmem144a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 21313165 ~ 21321482 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001907
AATCGTCAGCTGACACGGAAGTCAAGTCAATTATTCAAAGAGCAGTTCTCGCCTCGATATACTTTATTACGTCGATTTATGCATGAAAGTAGCTTTTATTAATGtctgttttaatttttatgtgtGTCTAGTATGAATCCTTACGTGACCGCGTTTATCGTGGCTCTCATCTGCGCGCTCTCCACCGGCGCCGCGCAACACCTGGAAAAAGAAAATTGGCTGTCACACCGTCCAATTGAGTCCAACAGCACATCCAACTCCTCCGACCTGACTTATGGATTCATATCCTGCGCAGTGTCTGCGGTCTTCTTCGGTAGCAACTTTGTACCGGTGAAAAAGATTGAGACTGGGGATGGTATGTTTTTCCAGTGGATCCTATGTGCTGCTATATGGACAGTCTCCCTTGTGGTGAACATCATTCTGAACAGTCCTAAGTTTTGGCCTCTTGTTATGCTGGGAGGAGCTATTTGGGCTACTGGAAATATAACAGTAGTTCCTATTGTAAAGACTATTGGACTTGGTCTTGGTCTTCTTATATGGGCTTCATTTAATCTGCTGTTGGGTTGGGCCAGCTCACgGTTTGGCTGGTTCGGTATTGGTGCTGAAACTGTTTCCAAACCAGTGCTGAACTACTGTGGAGCAGGTGTATGTTTATTTAGTGCCATTGTATTTTTCTTTGTGAAGACCGATGTTCAAAGATCAACAACATCTGAAGAAACACCACTACTAATAGACCATGTAGTCAACGCAGAATCTGTGGTGGCAACAGATGATTCTTGGGTGGATGCATTAAGCCCACGCATGAAACGTTTCGTTGGATCATTCCTTGCTGTTGTAGCTGGACTGCTGTACGGATCATCTTTTGTTCCAGTTCTGTACATAAAAAATCATGCATCAGATCCAGACAGCCCATACAATGGGGCTAGCCAATTTGATCTGGACTACGTATTTGCACAATATAGTGGGATTTTCCTTGCTAGTACCGTGTATTTTCTTCTGTACTGTGCCATCAAAAGAAACAAGCCTCAGGTGTTTCCTAAAGCAGTTCTGCCAGGATTCCTTTCTGGCATCATGTGGGGTGTTGCTACGTGCTGCTGGTTTCTGGCCAACCACTATCTCAGTGCTGTAGTGAGCTTCCCCATTATCACCACTGTTCCTGGACTGATTGCAGCTCTTTGGGGTGTTCTGGTGTTCAAGGAAGTGAAGGGTTGCCGAAATTACATTGTCCTCATTTTTGCGTTCTGTCTGGTTCTATCTGGGGCATTAATGACTGCATTTTCAAAGATCTAAATCTTTTAAGGGCAAGAAATGCACAGAACACATTTTATTCTAGTTTTCTTTTAAAccatattttaataacttttgaaagctgcaaattgtaaatgtattatgtgGTTATTACAGGTAATACAGCTACAAGCTGAAACTTACTGAAGAAAACAATATTGTATTTATCAGAAAGGGATGTGGTCCTTAAACTTGAAATGTTACTGCAACAGCAATATTCGCACATGTTCTGTTTATGTTATTGGGAACCTAGTTccctgtattttaattttatttgcaatAGCACACTTTTTTCTGTTTACACTATAATAGACCTCACTGTACTTTGGCATATAATGGTTAGTGGTTTCTATTATACAGTAAGATTCAGTGGATCTTATTTCACAGGACTTACTTAATACATTTTTGAAGAAGAATATGAAgtctattttaatttttgtatttaatttaatgcacTGTTTTTCTTGGTAAAAACATGTCCTTTTAACCCACTTTTTTGTATTTCTAATTATTCAGAATGGAAATTCATAGCACTGTAGTAGCATTTTTACTGTAATAACATTACAGTACAGTTTAGTTTTAAAGTTTCagcactatataataataattttttctttctgaatttctgaaactgtatataatattagaGGTAAATGTCATGAGTTTCTCCATGATAAAAATTGAGAAaaccttgtgtttttttttttctttactgctGCCAAGATGTCAAAGGCCTTTGTTTTATAATTGATACATTTTTTGTACTTCTTTCTGAAAGGGAAATAAAGGGCCCTATAATACACCTGGGGCAATAAGGTGCAAAATGTGTTTCtatgacgtgttgctattttt
>TCONS_00001908
CTCGCCTCGATATACTTTATTACGTCGATTTATGCATGAAAGTAGCTTTTATTAATGtctgttttaatttttatgtgtGTCTAGTATGAATCCTTACGTGACCGCGTTTATCGTGGCTCTCATCTGCGCGCTCTCCACCGGCGCCGCGCAACACCTGGAAAAAGAAAATTGGCTGTCACACCGTCCAATTGAGTCCAACAGCACATCCAACTCCTCCGACCTGACTTATGGATTCATATCCTGCGCAGTGTCTGCGGTCTTCTTCGGTAGCAACTTTGTACCGGTGAAAAAGATTGAGACTGGGGATGGTCAgtcattttttctttttggttttgcACACTTTTGCCTCCTTTtaggctttttttaaatgtcacagtAAAGGTTTTTTGTACTACAAAGTGTCAACAGAAGAAAATGCAAAGTAATATTTTAGCAAAAGGGTAAGCACAAATAAGACTTATTCATTTTCATTGTATGGAGCAAAGATGGAATAAAAGTAAAAGGTGACAGTCCCTGATA

Function

symbol description
tmem144a Predicted to enable carbohydrate transmembrane transporter activity. Predicted to act upstream of or within carbohydrate transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM144 (transmembrane protein 144).

GO:

id name namespace
GO:0034219 carbohydrate transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0015144 carbohydrate transmembrane transporter activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040822-12 Predicted to enable carbohydrate transmembrane transporter activity. Predicted to act upstream of or within carbohydrate transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM144 (transmembrane protein 144).

Ensembl:

ensembl_id ENSDARG00000037409

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001907 False 2139 mRNA 0.38 12 21313165 21321482
TCONS_00001908 True 519 lncRNA 0.40 2 21320823 21321435

Neighbor

gene id symbol gene type direction distance location
XLOC_001191 npy1r coding downstream 15417 21242836 ~ 21297748 (-)
XLOC_001190 RAPGEF2 coding downstream 109051 21135012 ~ 21204114 (-)
XLOC_001189 BX323083.5 coding downstream 297235 21010689 ~ 21015930 (-)
XLOC_001188 BX323083.2 coding downstream 307232 21000784 ~ 21005933 (-)
XLOC_001187 BX323083.3 coding downstream 317139 20990877 ~ 20996026 (-)
XLOC_001193 gria2a coding upstream 11586 21333068 ~ 21409877 (-)
XLOC_001194 glrba coding upstream 101528 21423010 ~ 21483832 (-)
XLOC_001195 wdr19 coding upstream 174368 21495850 ~ 21538673 (-)
XLOC_001196 ncapd3 coding upstream 218971 21540453 ~ 21563040 (-)
XLOC_001197 adamtsl7 coding upstream 255192 21576674 ~ 21599219 (-)
XLOC_001186 BX323083.1 non-coding downstream 327041 20980975 ~ 20986124 (-)
XLOC_001184 CT583646.1 non-coding downstream 382722 20929437 ~ 20930443 (-)
XLOC_001199 CR786570.1 non-coding upstream 358882 21680364 ~ 21680478 (-)
XLOC_001204 NA non-coding upstream 678299 21999781 ~ 22001050 (-)
XLOC_001205 CR388092.1 non-coding upstream 870470 22191952 ~ 22192067 (-)
XLOC_001211 FP245458.1 non-coding upstream 1342241 22663723 ~ 22674613 (-)
XLOC_001224 NA non-coding upstream 2095433 23416915 ~ 23436608 (-)

Expression


Co-expression Network