CI01000299_05818562_05822413


Basic Information

Item Value
gene id CI01000299_05818562_05822413
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5818406 ~ 5823867 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_05818562_05822413.mRNA
AATGTACTTGTATGTGTGTAAATGTTTGGCCATAAAACCTCAGAATTTCATTATTTTTCATTATATTCATGATGACTGAGCGATTCTGATGAGGACACCAAAAAGCACTTTATAGTGATATTTACCCGTATGGTAAAAATGTTCATTACTCAAAGCTTTTCAAAACGGTGCACACTAACGACATCTTGTGGTCAAAAGGTGGAAAAAGATGCCTTTGTGTCCCAGACGACCCAGACATTTTTGGGCACAATTAGTCTATATATATATATATATATATATATATATATATATATATATATATATATAAAAGTAATGTTTTTCACATGCCATTTTACACAATTTGAATAAATTATACATTTCTGGGAAAAAAATAGGCAAGCTTAAGCATATATTAGCAAAATAAATGAAGATTATCATAGAATGGTCAGCTGAAGTACTTATGAGCTAGGAATAAATACAAACTGAACATGCACAAAAACTACACATGTAAATATTTATAGTATGTTGCAACAATCCTTATCCTTATAAAAAGAAAATCATTGTTAGGCATGGCTGTGTTTCCAGTTTGTTTTATTATGCAATACATAGGCATTAATTTCATATTTCAAGCATGTTGTTTGTGCACTTAATGTAATAAACATCATACATTAGAGAAATAGGTTATAATTAGTCAAGACATCACGATAACAACTTTTAAACAGGCATTACCACCTGGGTCCTAAAGGAGACTTGATTTCTGGGGAGGGGGACTCGATTTCTCATGACACCGGTACAGACGGCATAACTGTAGCTGAATGAACCACACAAACCCGAAGACTCAATTCTGTTTCCGGTGGTACAGCTAGATATGACGTGACAAAACAATGAACTACAGATCGGGATGTGAGGTAATCTAACAGACTGCACAGCCTGGAGCAATGAATCAATCATTTCTGTTTGTCATAATTTGGCCTTGGTTGCATTATTGCTTTTTTTCTTATTCAAAATACACCGATCAGCATAACATTATGACACTGACAGGTGAAGTGAATAACACTGATCATCTCTTCATCACGGCACCTGTTAGTGGGTGGATATATTAGGCAGTTGATGTGTTAGAAGCAGGAAAAATGGGCAAGCATAAGGATTTGAGCGAGTTTGACAAGGGCCAAATTGTGATGGCTAGACGACTGGGTCAGAGCATCTCCAAAACTGCAGCTCTTGTGGGATGTTCCCGGTCTGCAGTGGTCAGTATCTATCAGAAGTGGTCCAAAGAAGGAACAGTGGTGAACCGGTGACAGGGTCATGGGCGGCCGAGGCTCATTGATGCACGTGGGGAGCGAAGGCTGGTGAACGAGATTCAAAGTTCTGAGTCAGTAAAATGATCTGAACTTCCCATTACTAGGAGGAACGCAAAACACAAAATCTGCAAAAATCAATTGGTTGCTGAAACCAAGGCGGACTGCCAGCCACTGATGGGTCACGTGAAGATTGAACCCCTACAGGAGTCCTTTAAGGGGCAAAAACTGGTGAAAGTTAAACCATGGGTGAAAGTGTACCTGTTGAGCAGAATGTTCTGGTTGAGAAGAAAGGAGAAGGAAGGGATTGCTTTGTCGAATGCAAGAAATCAAGCGGAAAATGATGTGGAAGAGATGGAACGGGACGAGTCCGATGGAGAGGGTTTTGAAAAATGTATTAGGTCAGTGGCAATATTGCAAAAGATGCTGTCAAAGACAGCTCATGATCTGAGTAACATGGCGAGTGTGTATCTGGTGGATGTGGACACGGCGCCGGTGATTTTGATGCATTTCCACACATTCAGATCTCCAGATCATACCAAGTTTGTGGGAAGCTTCAAAACCAAACAGGACTTCATGGATCTGATTGAAGTGATCTATCACGGCGCCATGAGAGGTAAACTGATCGTCCGAAGCCCGATAGACCCGAGAAACATTCCCAAATATGATCTGCTGTACCACGACATCTAGCAGCAGTAATAGAGTCACTGACGGAGACTAAAGTGAGCTTTCAGATGATTGTCTAAACGAGAGGATGGAGAGTTTCCTGTGGAAGCGACAGTCTGAAGTATTTATTATGCCACACTTGTTTTGTGTCGTGATATTTTTCTATGTTTTTAAAATAAA

Function

NR:

description
thioredoxin-like protein 4b

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_05818562_05822413.mRNA False 2123 mRNA 0.40 4 5818406 5823867

Neighbor

gene id symbol gene type direction distance location
CI01000299_05802706_05815472 MRPL16 coding downstream 2934 5802504 ~ 5815472 (-)
CI01000299_05739937_05770480 MRPL39 coding downstream 47599 5739808 ~ 5770807 (-)
CI01000299_05602070_05604608 NA coding downstream 213791 5601983 ~ 5604615 (-)
CI01000299_05512316_05521322 NA coding downstream 297084 5512051 ~ 5521322 (-)
CI01000299_05478688_05502027 ADAMTS5 coding downstream 315138 5477482 ~ 5503268 (-)
CI01000299_05826769_05831144 NA coding upstream 2099 5825966 ~ 5831312 (-)
CI01000299_05831615_05835696 NA coding upstream 7524 5831391 ~ 5835808 (-)
CI01000299_05849494_05852270 NA coding upstream 25535 5849402 ~ 5852506 (-)
CI01000299_05856747_05860959 NA coding upstream 32849 5856716 ~ 5862986 (-)
CI01000299_05896205_05898855 NA coding upstream 72176 5896043 ~ 5898857 (-)
G407848 NA non-coding downstream 42865 5774249 ~ 5775541 (-)
G407764 NA non-coding downstream 178540 5634840 ~ 5639866 (-)
G407734 NA non-coding downstream 263561 5552628 ~ 5554845 (-)
CI01000299_05457285_05462908 NA non-coding downstream 355234 5456864 ~ 5463491 (-)
G407669 NA non-coding downstream 400035 5413334 ~ 5418371 (-)
G407858 NA non-coding upstream 105772 5929639 ~ 5930546 (-)
G407827 NA non-coding upstream 121508 5945375 ~ 5946025 (-)
G407825 NA non-coding upstream 139813 5963680 ~ 5969556 (-)
G407881 NA non-coding upstream 194675 6018542 ~ 6023664 (-)
G407884 NA non-coding upstream 201158 6025025 ~ 6025802 (-)
CI01000299_05428160_05443433 APP, APPA other downstream 362298 5427661 ~ 5443433 (-)
CI01000299_04913779_04927715 NA other downstream 889588 4913373 ~ 4927715 (-)
G407413 NA other downstream 1267685 4475994 ~ 4550721 (-)
G405053 NA other downstream 3800356 2017687 ~ 2018050 (-)
G407805 NA other upstream 3969 5835889 ~ 5835989 (-)
CI01000299_06526127_06532048 CEP97 other upstream 708134 6526127 ~ 6532048 (-)

Expression


Co-expression Network