XLOC_012728 (BX470170.1)



Basic Information


Item Value
gene id XLOC_012728
gene name BX470170.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 17675340 ~ 17675455 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00025420
CTACTAGCAAATATCAACCTGCAGctcaagactggttactcactgaagctaagcagggctgagcctggtcagtacctggatgggagaccacatgggaaaactaggttgctgttaaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000106981

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00025420 True 116 rRNA 0.48 1 17675340 17675455

Neighbor


gene id symbol gene type direction distance location
XLOC_012726 nlrc5 coding upstream 17538 17624295 ~ 17657802 (+)
XLOC_012725 herpud1 coding upstream 53514 17600570 ~ 17621826 (+)
XLOC_012724 slc12a3 coding upstream 76585 17583479 ~ 17598755 (+)
XLOC_012723 nup93 coding upstream 94818 17537311 ~ 17580522 (+)
XLOC_012722 mt2 coding upstream 139361 17534627 ~ 17535979 (+)
XLOC_012729 rspry1 coding downstream 49955 17725410 ~ 17751843 (+)
XLOC_012730 si:ch211-216l23.2 coding downstream 79055 17754510 ~ 17775588 (+)
XLOC_012731 ZNF423 coding downstream 111093 17786548 ~ 17997474 (+)
XLOC_012732 si:ch211-212o1.2 coding downstream 325240 18000695 ~ 18060544 (+)
XLOC_012733 cbln1 coding downstream 428780 18104235 ~ 18110032 (+)
XLOC_012719 NA non-coding upstream 192116 17473975 ~ 17483224 (+)
XLOC_012716 NA non-coding upstream 495263 17178493 ~ 17180077 (+)
XLOC_012714 BX950194.1 non-coding upstream 601319 17072075 ~ 17074021 (+)
XLOC_012712 NA non-coding upstream 685623 16986090 ~ 16989717 (+)
XLOC_012711 CR925798.1 non-coding upstream 692274 16978628 ~ 16983066 (+)
XLOC_012734 NA non-coding downstream 437588 18113043 ~ 18379358 (+)
XLOC_012735 BX649612.2 non-coding downstream 576044 18251499 ~ 18251615 (+)
XLOC_012739 NA non-coding downstream 1000218 18675673 ~ 18676884 (+)
XLOC_012740 NA non-coding downstream 1033434 18708889 ~ 18710155 (+)
XLOC_012741 BX649641.6 non-coding downstream 1050523 18725978 ~ 18726093 (+)

Expression



Co-expression Network