XLOC_012725 (herpud1)


Basic Information

Item Value
gene id XLOC_012725
gene name herpud1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 17600570 ~ 17621826 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025405
CCGCCGACGAATTGCCAGTGCGCATGCGCAGTGCGTGGGGCTTCAGGACAGGCTCCACGTCTGAACACGAGCTCATCTCGGCCAATCAGAGGCGGCCACAGTGTGTTTGGAAACAACACACGCAAATACTTCACGGCTTATGAGCAGCCTCCTGAAACTTCTTGAATCAGGAACCTCTGCCTTTGCCTAGCGTGTGTTGTCCTTGTGTCTGTTTAAATCGATACGCATCCGTTCTCACTTTAGATATTTCATGCGCGTCTTAATATAGTTTGATTAAAAAGGAAGAATGGAAAATTCTACGGTGTTTGATAAAGAGACGATCTCGCTGGTCATTAAAACGCCTAATCAGTTTCACGGAGATCAGCTGATTGAGGGAGTTCGCGCGGACTGGACCGTGAAAGACCTCAAATGTCACCTCTCCAAGGTTTATCCCAACAACCCGGCTGAGAAAGACCAGAGACTCATTTACTCAGGCAAGCTGCTTCTGGACAACCTGCTTATCAGAGATGTTTTCTCAAAGGTTCCTTCAGATACCAAACCCACTCTTCACCTGGTGTGTGCAGTGAGACCCCAACCTGCTTCCCAACTAGGAGCAAGACCCAAAGTGACATCGACACACCAGCAGAGTTCACAGCCTTCCCCGCTAACTCCTAGCCAGTCTTCTGGACCATCTGTGACCTCTTTGCACTCCACTGATGGCCTAAGGCAGCGAGGTCATGCCACATTGCCTGATACTAGTGCCAACACATCTGCGCCTGTAACAGCAGCGATGAACCACCCTGCCTTCCCCACATATTCTCTTTACAGTCCACAACAGCTGCTGTGGTTGCAGCAAATGTATGCTCGCCAGTACTACATGCAGTATCAAGCTGCAATGGCAGCCGCTGCCTCGGCTCCAATGACCACCCCTGCTGCCGCTTCCTCGCTCCCTGTTGGCCCTCATCAAGCTGCTGTACCTGCAGCTTTACCCAATCAAGGCCCCATCAATGAcctaccagccaatcagaatgcccCAGGACCTGCCTTCATCAACCCAGAGGGAGCCAATCAAAATCTCCGTATGAATGCCCAGGGTGGGCCTGTGGTCGAAGATGAGGAGGACATGAACCGAGATTGGCTGGACTGGATGTACACAGCATCACGATTGGGTGTCTTCCTAAGCATTGTATACTTCTATTCCAGCATGAGCCGCTTCATCCTGGTCATGAGCAGCCTGGTTATTATGTACCTACACACAGCAGGCTGGTTTCCTTTCAGACAGAGGCCTCAAGCCAGGCCTCAAAATGAGCCAGCACCCGAGGTCAATCAGAACCAGCAGAACCAAAATGAGGACCAACATCCAGAACCCGTGGCGCCACCTGCTGAAGTGGAGGATGTTGGTGTTGTTGACCCCGCGATGACAGCAGTGCCTGTTCCCCAAGTCAGAGCACCCATCCTATGGACTGCCTGGGtgttttttaaagccttttttgctTCTCTGATACCTGAGCCTCCACAGGGTATTGCAAACTGATCCAGAAGCAGTCAGACAGAAATGACAAAAACTGAACTATCAAGCTCTTAGGACAGGACATTATAAACAAAGGCTACAAATCCTAGAAGTGGTAGCACTTTCCAGTTCTTTTGGCTGTGTGACCTATGGCTGCACATTCTAAACAAACAAGTGCTTGGACATGGAGTTGTAAATATCGCTGGACAGTTTTTGCACAGCACTTTAGATAACCGCAACGGCTGGAATCGATAGTGTCGGTTGCCTGACCTGATCCTCTTATGTAGGCTTCTGTCACCAAGACTTCATTTTTTTGAAGTGCTCCTCGATGAGTGTCCAAGGATTAAACTCATGGGATTATCTTATTAAGGTTCTAGTATGATGGACGACGAAGGCCACATATTGATTTTGTTCTAAGCGCATGAAAAGATGGAAAGTGCTTGGGAAAATGCATTTGTGGTACTTTGAAGCTAATGGCGTTTATGCAAGTAAAGTATGCCTACATGTTCTCTTTTTTAATTGTGCTCGACCTGTGAAATGAGTAATGTTAATATTTATGAGGGACGCGTTCAAGTATTGTGAGTGGAATTTGCAATTCAATGAGGAGAGTTTGTTGGTGACCTCGGGATGAGCAGAAGGTGAATGAACCACACTTTGAATATCGCATCTTCATGACATGATGGAACTGCACTTTGGGACCTGCAAAAGAGGAGAACAAAATATAACtaataatatatatgaaaaattcAAATGACTGATTTGTAATCTGATATTTATCAACACTGTAGCATTGCTGTCATTTCAGATTATGTATAATCAAGCTTTGTTATTAACATCATGAAAGTAAGCCTCTTTGTAccagaaaatgaaaacaataaacacaatttCCTCATTTCAGTTTCACTTTGAAGCTCTTTGAATAGTGTCATAGAAATGTAACAgggttttgattttatttgtatcacTTTTtcttgtgtagtttttttttaattttaaacatctATCTGAAAGTTCTGAATCTGAAAGCTGTTTTTTCCCAAGTTTGAGttcatcatttaaaaatgtaatgtaaatacttTGATCTTACTATAGTTTGTATTTCTCCTAGGTCAGATACATGCATTATGCAGCTAGTTCATCCAGTTGGTGGCTTGTGTACATGTATTACCCATATGTGCTGTTGCATGTTTTATAGCCTCTCTGGGGTGATTTttgagttttaatttaatttaactgtttctgtttcagctagctgaatgatttttggtgacattaTATTTTGACACTTATTTTAAAACTCAATGGTGCACTATGACAAGGTTtcctacccttttgttatgttcgggatgaaaatACCACTAAactaaactgctgtaaaaatgcatccgATAAATCTGTTATTCAGCTTCAATCTTGATCAAAAATACTACATTTCTTAGAAAAtttcaggattttaactctttagtTACTGATTTGGTGAACAAACACAAAATGATGGATTTTCTTTATAGAAAGtagttgtggactggattttctATTACATTTGATCAAACTCTTGAATGTGAAACAACATtccctttgatgcattgtttttgattcccatttgattttgatttttacCATTGATCATTAGTTTGcaacattaaccctttagataggcctgtgcaaaaaaagcctagtttctggcttttatatggaataTAACAGCAGATTAaattgtgtgtctgtgagagtgaaCTTTGCGCACTTGCCTTGACTGAGTGTCTgataaaatcaaaatatgcatctcagctctcagaactacaatgactaaataaaaacaaagactgtgtgtgtatttatgcaccatcaaatgtggttatattGGAAGTCAATGTAGCAAAAACAGTCACCAAAAAGTAAGTAAATTAATCTAACAATGTGTCAAAGCCAATGTTGGTACTGatctttcacatgtccaagactgtgttttaaaatttttgttttaaagaaacagtccacaattactttttaccttaaaaatacatcttttttcaccaaatcagtgacatcatttataaatttggcaattaaagagtaaaataatgtttttaaaaatatatatttagtagtTTTGCTcaagactgaggttgattaacagatttatgcaaaaaattattaatctgatgcattttttaacagcagtttaattcagtggatgttttcatcctgatcataacaaaagggtagtaaactTGAACCgtgcacaagggttaataaaCAGTGTATTGATTAACATGTCTTAGTGAGATACTAACACATGTAAGCACACTTGGTATGTTTTAATTGCTAAAATAACATTATCCTGTACACTTTTATCAAGTAGTCAGATTTGTCACTAGTATGTTTATACATTGTTTCTATGGTTTGACACGTCAGTGGCACATTATTATTAGCATGTTGAAACCAGTAGCTAGAATATTTTAGCTAGTGCTACGTTATCGCACATTATCTACTTATCAGTAGCATGTCTAGTTACTAGAATGTTTCAGTTTTAATACCAGATTGCATGTTAACCATAGAAGCATGTTTTAACAAGTCGTTAGCGTGTTGGTGCTACCATGCATGTTTTAGCACAATGTTTACAAGTTTAGTATGATAAAACATGGTTAATTTAAAGGACATATTTTAGCAAGTGTTTTGATGATCTTAGCTTGTTTGTTATGTTTTGTCAAATTGTTAACATGTTTTGCATTGGTGGTATACTTTAGCAAGTTGTCATCATGTTTTTGCACACTATTAGCATGTTGTGGCAAGTTTCTAGTATGTTTGTCTTCAACTTAGTGTTGTTAGCAGGTAAAGTCGAGATAAGATACATGACCGGCCGGAAGttcgatatgcacatcaatatagctacatttttatgacacttcataacaataattcatatttttacagcactgtgacggctgggtttagggttggcgtagatgttaaaaacagtacagtttattgggtaatttaatagagaacacaaataatactcggtacagcTACAGTTTTTGTGTTACTGTGGCGgctgggtttagagttggggtggaggtagacgttaataaaatacaattaataggacatttaataaataatataaatcattttctttaacttctggccacaaccctgatctagcaacaactttGTTAGCAGGCTACGTTTTTGACAATGTGTTTATTTGCACAAACTGGTAAATTCTGGGCCTATAGCTAGACTAAAAACGTCACAGCTCAATTATAATACGCAAAACAATGCATTATCTCTTCACAGTGATAACATTTGTCTACAGACAGActacaatattttttataatttgtcaACAACCTATTTATTTCCAAAGCCACTTCCTGCAGACTCTGCTGTTCACACCTAGAAGAATTTATATCAATTTTTAAGACAGTGAGGTtacttgaagggatagttcacccaaaaatgaaaattctgtcatgatttactcacccttgacttgttggaaacctgtaattaattatatttgttattCCTACTATGAATGCCAATGGTTACGGATGTCtggtcttcaaaatatcttaataaactcaaactggtttgaaacaagtcgaGGCTTAGTAAATGTTGacagacttttattttttgggtAAAGTATCCCTTTAATGGTTTTGAGCTTGTCCACCTACGTGAACTTTGTCCTTCTCTTGTCCACTCTGTCTatatcttttatttgttttgtgcaGCCGATTGTCCAGAAAACATTGCTGTGGACTGTTTACTGTCCTCCAGTAACCTCGAGCAACATGTGCAAGTCGGCCTGAGGAGCAAATCAGCCCTTACAGGTCCTGTCCACCCCCTCTTCCTCTGGGACACCGCTGGATCTGTCCCTCCTCCTCAGACACTTGCTGAATGAAAACAGGGCTCTTTTGAAGAAGCACTATTAGGAGTCAAAGACTGTTGAGATGGAGAGGAGAGCAGTGCTGTTCCTGGTTGTCGCTCTGGTCAAGATAAGCTGTTGCTGTCTGGATCCTCCTGCTGCCTACAGGTTTACAGGAGCTGTTTGTAGGCTTACCTATCCTGCTGCTGTAGTCTGTAAGTACATGCTCATTTATGCTAGTCAGACCTTCATGTTATATCtgcattattaatttaattaaaaaaactg
>TCONS_00025406
AGCTCATCTCGGCCAATCAGAGGCGGCCACAGTGTGTTTGGAAACAACACACGCAAATACTTCACGGCTTATGAGCAGCCTCCTGAAACTTCTTGAATCAGGAACCTCTGCCTTTGCCTAGCGTGTGTTGTCCTTGTGTCTGTTTAAATCGATACGCATCCGTTCTCACTTTAGATATTTCATGCGCGTCTTAATATAGTTTGATTAAAAAGGAAGAATGGAAAATTCTACGGTGTTTGATAAAGAGACGATCTCGCTGGTCATTAAAACGCCTAATCAGTTTCACGGAGATCAGCTGATTGAGGGAGTTCGCGCGGACTGGACCGTGAAAGACCTCAAATGTCACCTCTCCAAGGTTTATCCCAACAACCCGGCTGAGAAAGACCAGAGACTCATTTACTCAGGCAAGCTGCTTCTGGACAACCTGCTTATCAGAGATGTTTTCTCAAAGGTTCCTTCAGATACCAAACCCACTCTTCACCTGGTGTGTGCAGTGAGACCCCAACCTGCTTCCCAACTAGGAGCAAGACCCAAAGTGACATCGACACACCAGCAGAGTTCACAGCCTTCCCCGCTAACTCCTAGCCAGTCTTCTGGACCATCTGTGACCTCTTTGCACTCCACTGATGGCCTAAGGCAGCGAGGTCATGCCACATTGCCTGATACTAGTGCCAACACATCTGCGCCTGTAACAGCAGCGATGAACCACCCTGCCTTCCCCACATATTCTCTTTACAGTCCACAACAGCTGCTGTGGTTGCAGCAAATGTATGCTCGCCAGTACTACATGCAGTATCAAGCTGCAATGGCAGCCGCTGCCTCGGCTCCAATGACCACCCCTGCTGCCGCTTCCTCGCTCCCTGTTGGCCCTCATCAAGCTGCTGTACCTGCAGCTTTACCCAATCAAGGCCCCATCAATGAcctaccagccaatcagaatgcccCAGGACCTGCCTTCATCAACCCAGAGGGAGCCAATCAAAATCTCCGTATGAATGCCCAGGGTGGGCCTGTGGTCGAAGATGAGGAGGACATGAACCGAGATTGGCTGGACTGGATGTACACAGCATCACGATTGGGTGTCTTCCTAAGCATTGTATACTTCTATTCCAGCATGAGCCGCTTCATCCTGGTCATGAGCAGCCTGGTTATTATGTACCTACACACAGCAGGCTGGTTTCCTTTCAGACAGAGGCCTCAAGCCAGGCCTCAAAATGAGCCAGCACCCGAGGTCAATCAGAAC
>TCONS_00025407
TCTTGAATCAGGAACCTCTGCCTTTGCCTAGCGTGTGTTGTCCTTGTGTCTGTTTAAATCGATACGCATCCGTTCTCACTTTAGATATTTCATGCGCGTCTTAATATAGTTTGATTAAAAAGGAAGAATGGAAAATTCTACGGTGTTTGATAAAGAGACGATCTCGCTGGTCATTAAAACGCCTAATCAGTTTCACGGAGATCAGCTGATTGAGGGAGTTCGCGCGGACTGGACCGTGAAAGACCTCAAATGTCACCTCTCCAAGGTTTATCCCAACAACCCGGCTGAGAAAGACCAGAGACTCATTTACTCAGGCAAGCTGCTTCTGGACAACCTGCTTATCAGAGATGTTTTCTCAAAGGTTCCTTCAGATACCAAACCCACTCTTCACCTGGTGTGTGCAGTGAGACCCCAACCTGCTTCCCAACTAGGAGCAAGACCCAAACAGAGTTCACAGCCTTCCCCGCTAACTCCTAGCCAGTCTTCTGGACCATCTGTGACCTCTTTGCACTCCACTGATGGCCTAAGGCAGCGAGGTCATGCCACATTGCCTGATACTAGTGCCAACACATCTGCGCCTGTAACAGCAGCGATGAACCACCCTGCCTTCCCCACATATTCTCTTTACAGTCCACAACAGCTGCTGTGGTTGCAGCAAATGTATGCTCGCCAGTACTACATGCAGTATCAAGCTGCAATGGCAGCCGCTGCCTCGGCTCCAATGACCACCCCTGCTGCCGCTTCCTCGCTCCCTGTTGGCCCTCATCAAGCTGCTGTACCTGCAGCTTTACCCAATCAAGGCCCCATCAATGAcctaccagccaatcagaatgcccCAGGACCTGCCTTCATCAACCCAGAGGGAGCCAATCAAAATCTCCGTATGAATGCCCAGGGTGGGCCTGTGGTCGAAGATGAGGAGGACATGAACCGAGATTGGCTGGACTGGATGTACACAGCATCACGATTGGGTGTCTTCCTAAGCATTGTATACTTCTATTCCAGCATGAGCCGCTTCATCCTGGTCATGAGCAGCCTGGTTATTATGTACCTACACACAGCAGGCTGGTTTCCTTTCAGACAGAGGCCTCAAGCCAGGCCTCAAAATGAGCCAGCACCCGAGGTCAATCAGAACCAGCAGAACCAAAATGAGGACCAACATCCAGAACCCGTGGCGCCACCTGCTGAAGTGGAGGATGTTGGTGTTGTTGACCCCGCGATGACAGCAGTGCCTGTTCCCCAAGTCAGAGCACCCATCCTATGGACTGCCTGGGtgttttttaaagccttttttgctTCTCTGATACCTGAGCCTCCACAGGGTATTGCAAACTGATCCAGAAGCAGTCAGACAGAAATGACAAAAACTGAACTATCAAGCTCTTAGGACAGGACATTATAAACAAAGGCTACAAATCCTAGAAGTGGTAGCACTTTCCAGTTCTTTTGGCTGTGTGACCTATGGCTGCACATTCTAAACAAACAAGTGCTTGGACATGGAGTTGTAAATATCGCTGGACAGTTTTTGCACAGCACTTTAGATAACCGCAACGGCTGGAATCGATAGTGTCGGTTGCCTGACCTGATCCTCTTATGTAGGCTTCTGTCACCAAGACTTCATTTTTTTGAAGTGCTCCTCGATGAGTGTCCAAGGATTAAACTCATGGGATTATCTTATTAAGGTTCTAGTATGATGGACGACGAAGGCCACATATTGATTTTGTTCTAAGCGCATGAAAAGATGGAAAGTGCTTGGGAAAATGCATTTGTGGTACTTTGAAGCTAATGGCGTTTATGCAAGTAAAGTATGCCTACATGTTCTCTTTTTTAATTGTGCTCGACCTGTGAAATGAGTAATGTTAATATTTATGAGGGACGCGTTCAAGTATTGTGAGTGGAATTTGCAATTCAATGAGGAGAGTTTGTTGGTGACCTCGGGATGAGCAGAAGGTGAATGAACCACACTTTGAATATCGCATCTTCATGACATGATGGAACTGCACTTTGGGACCTGCAAAAGAGGAGAACAAAATATAACtaataatatatatgaaaaattcAAATGACTGATTTGTAATCTGATATTTATCAACACTGTAGCATTGCTGTCATTTCAGATTATGTATAATCAAGCTTTGTTATTAACATCATGAAAGTAAGCCTCTTTGTAccagaaaatgaaaacaataaacacaatttCCTCATTTCA
>TCONS_00025408
GTGTGTTGTCCTTGTGTCTGTTTAAATCGATACGCATCCGTTCTCACTTTAGATATTTCATGCGCGTCTTAATATAGTTTGATTAAAAAGGAAGAATGGAAAATTCTACGGTGTTTGATAAAGAGACGATCTCGCTGGCAAGCTGCTTCTGGACAACCTGCTTATCAGAGATGTTTTCTCAAAGGTTCCTTCAGATACCAAACCCACTCTTCACCTGGTGTGTGCAGTGAGACCCCAACCTGCTTCCCAACTAGGAGCAAGACCCAAAGTGACATCGACACACCAGCAGAGTTCACAGCCTTCCCCGCTAACTCCTAGCCAGTCTTCTGGACCATCTGTGACCTCTTTGCACTCCACTGATGGCCTAAGGCAGCGAGGTCATGCCACATTGCCTGATACTAGTGCCAACACATCTGCGCCTGTAACAGCAGCGATGAACCACCCTGCCTTCCCCACATATTCTCTTTACAGTCCACAACAGCTGCTGTGGTTGCAGCAAATGTATGCTCGCCAGTACTACATGCAGTATCAAGCTGCAATGGCAGCCGCTGCCTCGGCTCCAATGACCACCCCTGCTGCCGCTTCCTCGCTCCCTGTTGGCCCTCATCAAGCTGCTGTACCTGCAGCTTTACCCAATCAAGGCCCCATCAATGAcctaccagccaatcagaatgcccCAGGACCTGCCTTCATCAACCCAGAGGGAGCCAATCAAAATCTCCGTATGAATGCCCAGGGTGGGCCTGTGGTCGAAGATGAGGAGGACATGAACCGAGATTGGCTGGACTGGATGTACACAGCATCACGATTGGGTGTCTTCCTAAGCATTGTATACTTCTATTCCAGCATGAGCCGCTTCATCCTGGTCATGAGCAGCCTGGTTATTATGTACCTACACACAGCAGGCTGGTTTCCTTTCAGACAGAGGCCTCAAGCCAGGCCTCAAAATGAGCCAGCACCCGAGGTCAATCAGAACCAGCAGAACCAAAATGAGGACCAACATCCAGAACCCGTGGCGCCACCTGCTGAAGTGGAGGATGTTGGTGTTGTTGACCCCGCGATGACAGCAGTGCCTGTTCCCCAAGTCAGAGCACCCATCCTATGGACTGCCTGGGtgttttttaaagccttttttgctTCTCTGATACCTGAGCCTCCACAGGGTATTGCAAACTGATCCAGAAGCAGTCAGACAGAAATGACAAAAACTGAACTATCAAGCTCTTAGGACAGGACATTATAAACAAAGGCTACAAATCCTAGAAGTGGTAGCACTTTCCAGTTCTTTTGGCTGTGTGACCTATGGCTGCACATTCTAAACAAACAAGTGCTTGGACATGGAGTTGTAAATATCGCTGGACAGTTTTTGCACAGCACTTTAGATAACCGCAACGGCTGGAATCGATAGTGTCGGTTGCCTGACCTGATCCTCTTATGTAGGCTTCTGTCACCAAGACTTCATTTTTTTGAAGTGCTCCTCGATGAGTGTCCAAGGATTAAACTCATGGGATTATCTTATTAAGGTTCTAGTATGATGGACGACGAAGGCCACATATTGATTTTGTTCTAAGCGCATGAAAAGATGGAAAGTGCTTGGGAAAATGCATTTGTGGTACTTTGAAGCTAATGGCGTTTATGCAAGTAAAGTATGCCTACATGTTCTCTTTTTTAATTGTGCTCGACCTGTGAAATGAGTAATGTTAATATTTATGAGGGACGCGTTCAAGTATTGTGAGTGGAATTTGCAATTCAATGAGGAGAGTTTGTTGGTGACCTCGGGATGAGCAGAAGGTGAATGAACCACACTTTGAATATCGCATCTTCATGACATGATGGAACTGCACTTTGGGACCTGCAAAAGAGGAGAACAAAATATAACtaataatatatatgaaaaattcAAATGACTGATTTGTAATCTGATATTTATCAACACTGTAGCATTGCTGTCATTTCAGATTATGTATAATCAAGCTTTGTTATTAACATCATGAAAGTAAGCCTCTTTGTAccagaaaatgaaaacaataaacacaatttCCT
>TCONS_00025409
GTTCGCGCGGACTGGACCGTGAAAGACCTCAAATGTCACCTCTCCAAGGTTTATCCCAACAACCCGGCTGAGAAAGACCAGAGACTCATTTACTCAGGCAAGCTGCTTCTGGACAACCTGCTTATCAGAGATGTTTTCTCAAAGGTTCCTTCAGATACCAAACCCACTCTTCACCTGGTGTGTGCAGTGAGACCCCAACCTGCTTCCCAACTAGGAGCAAGACCCAAAGTGACATCGACACACCAGCAGAGTTCACAGCCTTCCCCGCTAACTCCTAGCCAGTCTTCTGGACCATCTccaatcagaatgcccCAGGACCTGCCTTCATCAACCCAGAGGGAGCCAATCAAAATCTCCGTATGAATGCCCAGGGTGGGCCTGTGGTCGAAGATGAGGAGGACATGAACCGAGATTGGCTGGACTGGATGTACACAGCATCACGATTGGGTGTCTTCCTAAGCATTGTATACTTCTATTCCAGCATGAGCCGCTTCATCCTGGTCATGAGCAGCCTGGTTATTATGTACCTACACACAGCAGGCTGGTTTCCTTTCAGACAGAGGCCTCAAGCCAGGCCTCAAAATGAGCCAGCACCCGAGGTCAATCAGAACCAGCAGA
>TCONS_00025410
AGGAGTCAAAGACTGTTGAGATGGAGAGGAGAGCAGTGCTGTTCCTGGTTGTCGCTCTGGTCAAGATAAGCTGTTGCTGTCTGGATCCTCCTGCTGCCTACAGGTTTACAGGAGCTGTTTGTAGGCTTACCTATCCTGCTGCTGTAGTCTTGAATGAGAAAACCACTGAAGTCATACAAGCCGCTTTCCAGCATGCCAAATATCCCAGTGTACAGGGAGAGCGATCAATAGGCTTTGGGACGGTCAAATACGGATTCCACAATTTAGAGATTCACAACCTTTCCATCGGAAAGAGCGAGTTTGAGCTGAAGGAGAATGTAGGGATCGGCATCGCCATTTCCAACGTGTATGCTGTATTTAAAGGGACCATCAACTATGGATATGGCAGCTGGCTGCTCAGCTTAAACCAGTCAATGGATTTTGAAGTTGAGTCTCAAATTGACCTGGTCATCAATCCAAAACTATacTGTGGTAAAGGCAAAGTGGCTGCAGACACATCCGACTGTTACCTCACATTTCACAAACTGAAGCTGCTTCTGCAAGGAGACAGAGAGCCAGGCTGGATGAAAAAGATGTTTACAGATATTGTGACTTTCACAGTGAAGTTAGTTGTAAAGTCACAGATCTGCAAGGAGATAAACAGTGTGGCCAACATACTAGCTGACTTTATACAGGAGCAAGCAGAGCAGTTTCTTAGTGAAGGAGGCATCGGTGTGGACATCTCTGTGACCTCCTCCCCAGTGATCAAATCGAATTATATAGAATCATACCATAAGGGTTTGGTTACTTTTAATAATGAGACATCAGACCTCAGCAACTCTGTGTTTCACCCTTCACAACTGTCTGAGGGCCGCATGCTTTACTTCTGGTTCTCTGATGGCCTTCTAGACCCGTTATTGGGTGCCATCCATAATGACGGACGATTTGTGCGCAGTATCTCTGGAACAGAACTCACGGATCTGTTTCAGACTGAGCTGTCTACAGCCAGGCCTGAACTGTTGAGTAAGTGGCTTTCTTCTGAGGGTCCGGTGTTAAAGGCAAGGAGTGTGTCGATTCCACACTTATGGACCACCACACAGGGCACATCAGTCAGAGTCATGGCTGGAGTTCAGCTCTTACTGGATGGTCAAGAGACGCCAGTGCTTTATTTTGAGACAGATGTAACAGTTGTTGTAAATGCCTCATATGCAGAAAAGAAACTAATTCTGAAGGCCACTGCACAGCGTATTTCTATAACAAATGTTTCCTCGTCGGAAGGAGCAATTGAGATGGAGGAGAGCTTGAGAGCTTATCTGCAGGAGGCTGTGGAGAAGATGGGAATCCCCAAAGTTGTGTCATACCTGGAGGTAGAATTGACCTCTTTGATGGATGAACATGGGCTCAATCTTTTTGACATCTTCAATCCCGAAGTTGTACCTCAGGACGGTTATGTGATGGTACAGCTGGATTTTGGATTTCCACAACATCTGCTGGTTGAGTTCCTCAAAAGGACGCTGGATTGACAGTTtttctcacacaaacacaaagtttGTAGAAATAGtttgaggaacacacacacacacacacacacacacacacacacacacacacgcacaaatacaATTGACTATGTGACTATATATATAGTGTAACTATTGAGcattcaaactttttttaaatacgaAAGTGTCAATCATCATGATCTTGTTTTATGTACATGTCCTTTAGTAATATTATCTGATGACCTTCATAATGTTATTCAGAGGTTGTGTTACCAATATTAAACATTTCCTGATGCTGTCTCACATAA

Function

symbol description
herpud1 Predicted to enable transmembrane transporter binding activity. Predicted to be involved in several processes, including endoplasmic reticulum calcium ion homeostasis; endoplasmic reticulum unfolded protein response; and regulation of response to endoplasmic reticulum stress. Predicted to act upstream of or within response to unfolded protein. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human HERPUD1 (homocysteine inducible ER protein with ubiquitin like domain 1).

GO:

id name namespace
GO:0030968 endoplasmic reticulum unfolded protein response biological_process
GO:0032469 endoplasmic reticulum calcium ion homeostasis biological_process
GO:0006511 ubiquitin-dependent protein catabolic process biological_process
GO:1902236 negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway biological_process
GO:1903069 regulation of ER-associated ubiquitin-dependent protein catabolic process biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0044325 ion channel binding molecular_function

KEGG:

id description
ko04141 Protein processing in endoplasmic reticulum

ZFIN:

id description
ZDB-GENE-041114-54 Predicted to enable several functions, including cholesterol binding activity; phosphatidylcholine binding activity; and triglyceride binding activity. Predicted to be involved in several processes, including glycerolipid metabolic process; lipid homeostasis; and plasma lipoprotein particle remodeling. Predicted to act upstream of or within reverse cholesterol transport and steroid metabolic process. Predicted to be located in extracellular region. Predicted to be part of high-density lipoprotein particle. Is expressed in asteriscus; liver; otic vesicle; and yolk syncytial layer. Human ortholog(s) of this gene implicated in carotid artery disease and hyperalphalipoproteinemia 1. Orthologous to human CETP (cholesteryl ester transfer protein).
ZDB-GENE-050913-47 Predicted to enable transmembrane transporter binding activity. Predicted to be involved in several processes, including endoplasmic reticulum calcium ion homeostasis; endoplasmic reticulum unfolded protein response; and regulation of response to endoplasmic reticulum stress. Predicted to act upstream of or within response to unfolded protein. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human HERPUD1 (homocysteine inducible ER protein with ubiquitin like domain 1).

Ensembl:

ensembl_id ENSDARG00000024314 ENSDARG00000030872

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025405 False 5657 mRNA 0.40 8 17600570 17611849
TCONS_00025406 False 1243 mRNA 0.51 7 17600639 17605788
TCONS_00025407 False 2209 mRNA 0.46 8 17600729 17608578
TCONS_00025408 False 2043 nonsense_mediated_decay 0.46 8 17600761 17608571
TCONS_00025409 False 618 nonsense_mediated_decay 0.52 6 17600946 17605795
TCONS_00025410 True 1789 mRNA 0.44 16 17611627 17621826

Neighbor

gene id symbol gene type direction distance location
XLOC_012724 slc12a3 coding upstream 1815 17583479 ~ 17598755 (+)
XLOC_012723 nup93 coding upstream 20048 17537311 ~ 17580522 (+)
XLOC_012722 mt2 coding upstream 64591 17534627 ~ 17535979 (+)
XLOC_012721 C18H16orf70 coding upstream 93560 17493859 ~ 17507010 (+)
XLOC_012719 NA coding upstream 117346 17473975 ~ 17483224 (+)
XLOC_012726 nlrc5 coding downstream 2469 17624295 ~ 17657802 (+)
XLOC_012727 cpne2 coding downstream 38332 17660158 ~ 17704546 (+)
XLOC_012728 BX470170.1 coding downstream 53514 17675340 ~ 17675455 (+)
XLOC_012729 rspry1 coding downstream 103584 17725410 ~ 17751843 (+)
XLOC_012730 si:ch211-216l23.2 coding downstream 132684 17754510 ~ 17775588 (+)
XLOC_012716 NA non-coding upstream 420493 17178493 ~ 17180077 (+)
XLOC_012714 BX950194.1 non-coding upstream 526549 17072075 ~ 17074021 (+)
XLOC_012712 NA non-coding upstream 610853 16986090 ~ 16989717 (+)
XLOC_012711 CR925798.1 non-coding upstream 617504 16978628 ~ 16983066 (+)
XLOC_012734 NA non-coding downstream 491217 18113043 ~ 18379358 (+)
XLOC_012735 BX649612.2 non-coding downstream 629673 18251499 ~ 18251615 (+)
XLOC_012739 NA non-coding downstream 1053847 18675673 ~ 18676884 (+)
XLOC_012740 NA non-coding downstream 1087063 18708889 ~ 18710155 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000013_05508865_05515065 CETP coding CI01000013 null 5508397 ~ 5515065 (-)