XLOC_012887 (olfcg3)


Basic Information

Item Value
gene id XLOC_012887
gene name olfcg3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 32950480 ~ 32955791 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025698
CACAAGTGTTCAATCAGGTCATTTGCAGTTGGCTGTCACGAATGAGCTAAACCTTGAAGATGCTTCTCTTTCTTTACACACTCCTGCTTTTCCATCACCTTCACACTAAGGCTGGAAACACTCTTTGCCGAATAATGGGAGACCCTCAATATCCACTGCTTTCCACAGATGGAGACATAACTATTGGAGCTCTTTTTCCAGTCCACAGCACAGAAACATTGCCTTCATTTGAATTTACAAAACAACCTCAGCTTCTATCATGCTCCagTGTGTACCTGAGAGATTTTCGTCTGGCACAAATCCTGATCTTTGCCATTGAGGAGATAAACAGAAGTGTACAATTGCTACCAAATATTTCAATTGGTTATAGAATCTATGATACCTGTGGTTCAAGACAGTCTACCATGAGTGCAATTATGGGACTAATGAATGGTCAGGAGTTTGGAGCAGGTGAGAGATGTAATGGACGGTCTCCTATACATGCAATCATTGGTGAATCAGAGTCTTCTGCAACAGTGATACTGTCCAGAACTACGGGACCTTTTAAAATTCCAGTGataAGTCACTCAGCCTCATGTGAATGTCTCAGTAATAAGAAAGACTACCCATCATTCTTCAGGACTATGGCTAGTGATTACCATCAGAGCAGAGCACTTGCTTATCTAGTTAAGGACTTAGGCTGGTCTTGGGTGGGAGCTGTGAGCAGTGACAATGAATATGGAAACTATGGAATGTCCATATTTCTGAAAATAGCCCAAGAAGTGGGGATTTGTGTAGAATATTATGCCAAATTCTACCGAACAGAGGCAGAAAATCTCCATAAAGCAGTGAATATGATTAAAAAAGGCACAGCAAAAGTAATTGTTGCTTTTGTTTCACTTCCAGAAATGGGCATACTTGTTGATCAGTTAAGCATTGAGAACATTACAGGACTCCAAATGATTGGTGTGAAATCATGGATAACTGTAAAAAGTTTCATCACTCCAAGCAGCTTTCATGTGCTTAAAGGGTCATTGGGGATTGCGGTGAAAAAAATCAGTGTTGAAGGCTTTGCTGAATATGCCATTAACGAATTTTGGAAAAAAGGTTTTCCATGTTTAAAGAGTGAGGTTAATTCATCTCGATATGCATTAAGTTGTAGCAGATATGAGGATCTCTTTGTGCTAAAATCAATCAGTGAGGATGTGCCTGAACAAAGATATGCAAGCTACGTGTACAAAGCAGTTTATGCTGTGGCACATTCATTACACAGTCTATTCAATTGTAAAGAACACGAAGGTTGTGAGAAAGACCTGACAATACAACCACAGCAGGTTGTTGAGGCTTTAAAAAAGGTCAAGTTCACCATAAAAACAGGGGATCATGTGTGGTTTGACAGCACTGGTGCCGCTGTAGCCCAATATGATGTTGTAAATTTACAGCTGGACTCATATGGTTCAACACTTTTTAAATCAGTGGGATACTATGATGCTTCATTGCCCCCTGAACAGCAGTTTGTGCTAAACACTACAAACATCATTTGGGCTGGAGGAGAGAAGGTGAGGTCCGTGTGCAGTGAAAGCTGTCCTCCAGGCACCAGGAAAGCTACACAGAAAGGAAGACCTGTCTGCTGTTATGACTGTATTCAATGTGCAGATGGAGAAATTAGTAATGAGACAGATTCGAATAATTGCAAACAGTGCCCAGAGGAATACTGGCCTAATACTGAGAAAAGTAAATGTGTGTTAAAGATTGTAGAGTTTCTTTCATTCACAGAGCTTATGGGCATCGTGTTAGTTATTTTTTCACTGTTTGGGGTAACATTGACTGTATTGGTGACCTTCCTGttttacagcaagaaggacactCCTATAGTAAAAGCCAACAACTCAGAGCTGAGCTTCCTGCTCCTCTTCTCACTGACTCTGTGTTTCCTCTGTTCACTCACTTTCATTGGCCGTCCCACTGAGTGGTCCTGTATGTTGCGTCACACAACATTTGGGATCACTTTTGTCCTCTGTATCTCTTGTATTCTGGGAAAAACAATAGTGGTGTTAATGGCTTTCAGAGCTACAATTCCAGGTAATAATATGATAAAATGGTTTGGTCCTGTACAACAACGACTCAGTGTTCTTGCTTTTACGCTTATACAGATTCTTATATGTGTGGTTTGGCTGACAATTTCACCTCCATTTCCaagcaaaaacattaaatattataaagaaaAGATTATTCTTGAGTGCAGTCTGGGTTCTACTATAGGTTTCTGGATTGTTCTGGGCTATATTGGCTTGCTAGCTGTCTTGTGCTTCATTTTGGCTTTTTTGGCTCGCACATTGCCTGACAACTTTAATGAAGCAAAATTCATCACATTCAGTATACTCATATTCTGTGCAGTATGGATCACATTTATTCCAGCGTATGTCAGTTCTCCTGGAAAATTGACTGTAGCTGTGGAGATATTTGCCATTTTAGCCTCGAGCTTTGGCTTACTTTTTTGCATATTTGCACCTAAATGTTACATTATCCTGTTCAAGCCTGAACAAAATACAAAGCAACATATAATGGGAAAAACAATATCCAAGAACTGAGAAATAAACTAACATTTTCTCtagattgttgtttttttttattgattattaattgaCAAAATGTGTCCCCCAAGTCCTGTTAATTAAGTTAACCAGGCAATTTAGGTTAATTAGTTAAGTCATTGGATAACATTGGTTTATTTTGTAGCCAATCCAAAAAATAATGGGGGTGGCATGGTgcctctgtggttagcactgttgcctcacagcaaaaaggtcactggttcgagtcccagctaggccagttggcatttctgtatggagtttgcatgttctccctgtgtttttgTGGGTTTCTTTCAAGTGCTTCGGTTGGTCATAGTGAATGTGAGAGtctatgagtgtttcccagtactggattgtggctggacgggcatctgctgcataaagcatatgccgaaatagttggcggtggcaacccctgataaagtgactcagccgaaggaaaatcataaaattaatatataaaatgggTGTTACGGTACATATATTTGTCCCAGACGGTTCGAGGCTCGCGGTTCTGTTTACCTTTTCCCACAACAAATACAATCAGTCCAGATGTACAGTGTCTGCTAGACAGAAAAGTTCACAGCAGTGCAACAACTGAAGAGCCATTTTCAAAGGATGCTTGATGGTGTCTGAAAACATGACAGCAGTTTTCGGTAGTTGTTCCGTTATTTTGCCATTGTCATCCCAACTTTCTAAAGTTTTTCTGATTGGTCCATCCACTGCATGGAAATTGACAAGTATGTATGACAAATGAGGACTCTTGTGGGTGGAAACTGAAATAAACATGCGGTGCTGCAAAAGACGCAAGTGTATAATGGTCATTCACGTCCATCaaacaatgaaaatataaaatactgtCTAATTATGTGAGCGCGTAAGTCAGTCTGTAAGCAACTGACTTatctactcacacacacacacataacttgTTTTCCGCTACACCTGCTGATATGAATGGCACAACACTAGCCTTTTCTTCAAAATAGATTTCAGCCtattcaaaattaaaattctgttcaGAAAAGCAAATACCCATTTGTTTTTATTCCTGTTGCACCACACTCCACAAGGAAATGTGACCCAGAACCGAGGTATGTATCGAACTGTGACTCCTGTGTACtgttaaaacaaatgcatttgaagacattatttattcattcattttcttttcggcttaatatctttattaatctggtgtcgccacaatgaaccaccaatgtatccagtatatgttttacgcagcggatgcccttccagctacaacccaccactgggaaacatacatacacactcattcacacacacatacactacaaataatatagcttacccaattcacctatacgggatgtttttgtacttgtgggggaaactggagcacctggaggaaacccacgagagcATGAGAAtaatgcaaacttcacacagaaagtccaactgaccaagccgaggctcgaaccagcaatcttcttgctacccactgtgatGCCCTAGAGGACATAATGCAGAGAATTTTATTAGGCGGCCATTAAggttatatatttatgtaatgcTTGCATCATGTTACTGTTTGAGTGTTTCAATCATTTATGTATGTAGTGATAATTTGTCTGTGTAaagcactttattttattaattaaaagtttaaaag
>TCONS_00025699
ATGCTTCTCTTTCTTTACACACTCCTGCTTTTCCATCACCTTCACACTAAGGCTGGAAACACTCTTTGCCGAATAATGGGAGACCCTCAATATCCACTGCTTTCCACAGATGGAGACATAACTATTGGAGCTCTTTTTCCAGTCCACAGCACAGAAACATTGCCTTCATTTGAATTTACAAAACAACCTCAGCTTCTATCATGCTCCagTGTGTACCTGAGAGATTTTCGTCTGGCACAAATCCTGATCTTTGCCATTGAGGAGATAAACAGAAGTGTACAATTGCTACCAAATATTTCAATTGGTTATAGAATCTATGATACCTGTGGTTCAAGACAGTCTACCATGAGTGCAATTATGGGACTAATGAATGGTCAGGAGTTTGGAGCAGGTGAGAGATGTAATGGACGGTCTCCTATACATGCAATCATTGGTGAATCAGAGTCTTCTGCAACAGTGATACTGTCCAGAACTACGGGACCTTTTAAAATTCCAGTGataAGTCACTCAGCCTCATGTGAATGTCTCAGTAATAAGAAAGACTACCCATCATTCTTCAGGACTATGGCTAGTGATTACCATCAGAGCAGAGCACTTGCTTATCTAGTTAAGGACTTAGGCTGGTCTTGGGTGGGAGCTGTGAGCAGTGACAATGAATATGGAAACTATGGAATGTCCATATTTCTGAAAATAGCCCAAGAAGTGGGGATTTGTGTAGAATATTATGCCAAATTCTACCGAACAGAGGCAGAAAATCTCCATAAAGCAGTGAATATGATTAAAAAAGGCACAGCAAAAGTAATTGTTGCTTTTGTTTCACTTCCAGAAATGGGCATACTTGTTGATCAGTTAAGCATTGAGAACATTACAGGACTCCAAATGATTGGTGTGAAATCATGGATAACTGTAAAAAGTTTCATCACTCCAAGCAGCTTTCATGTGCTTAAAGGGTCATTGGGGATTGCGGTGAAAAAAATCAGTGTTGAAGGCTTTGCTGAATATGCCATTAACGAATTTTGGAAAAAAGGTTTTCCATGTTTAAAGAGTGAGGTTAATTCATCTCGATATGCATTAAGTTGTAGCAGATATGAGGATCTCTTTGTGCTAAAATCAATCAGTGAGGATGTGCCTGAACAAAGATATGCAAGCTACGTGTACAAAGCAGTTTATGCTGTGGCACATTCATTACACAGTCTATTCAATTGTAAAGAACACGAAGGTTGTGAGAAAGACCTGACAATACAACCACAGCAGGTTGTTGAGGCTTTAAAAAAGGTCAAGTTCACCATAAAAACAGGGGATCATGTGTGGTTTGACAGCACTGGTGCCGCTGTAGCCCAATATGATGTTGTAAATTTACAGCTGGACTCATATGGTTCAACACTTTTTAAATCAGTGGGATACTATGATGCTTCATTGCCCCCTGAACAGCAGTTTGTGCTAAACACTACAAACATCATTTGGGCTGGAGGAGAGCAGAAGGTGAGGTCCGTGTGCAGTGAAAGCTGTCCTCCAGGCACCAGGAAAGCTACACAGAAAGGAAGACCTGTCTGCTGTTATGACTGTATTCAATGTGCAGATGGAGAAATTAGTAATGAGACAGATTCGAATAATTGCAAACAGTGCCCAGAGGAATACTGGCCTAATACTGAGAAAAGTAAATGTGTGTTAAAGATTGTAGAGTTTCTTTCATTCACAGAGCTTATGGGCATCGTGTTAGTTATTTTTTCACTGTTTGGGGTAACATTGACTGTATTGGTGACCTTCCTGttttacagcaagaaggacactCCTATAGTAAAAGCCAACAACTCAGAGCTGAGCTTCCTGCTCCTCTTCTCACTGACTCTGTGTTTCCTCTGTTCACTCACTTTCATTGGCCGTCCCACTGAGTGGTCCTGTATGTTGCGTCACACAACATTTGGGATCACTTTTGTCCTCTGTATCTCTTGTATTCTGGGAAAAACAATAGTGGTGTTAATGGCTTTCAGAGCTACAATTCCAGGTAATAATATGATAAAATGGTTTGGTCCTGTACAACAACGACTCAGTGTTCTTGCTTTTACGCTTATACAGATTCTTATATGTGTGGTTTGGCTGACAATTTCACCTCCATTTCCaagcaaaaacattaaatattataaagaaaAGATTATTCTTGAGTGCAGTCTGGGTTCTACTATAGGTTTCTGGATTGTTCTGGGCTATATTGGCTTGCTAGCTGTCTTGTGCTTCATTTTGGCTTTTTTGGCTCGCACATTGCCTGACAACTTTAATGAAGCAAAATTCATCACATTCAGTATACTCATATTCTGTGCAGTATGGATCACATTTATTCCAGCGTATGTCAGTTCTCCTGGAAAATTGACTGTAGCTGTGGAGATATTTGCCATTTTAGCCTCGAGCTTTGGCTTACTTTTTTGCATATTTGCACCTAAATGTTACATTATCCTGTTCAAGCCTGAACAAAATACAAAGCAACATATAATGGGAAAAACAATATCCAAGAACTGA

Function

symbol description
olfcg3 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0038023 signaling receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-159 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

Ensembl:

ensembl_id ENSDARG00000104854

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025698 False 4230 mRNA 0.40 6 32950480 32955791
TCONS_00025699 True 2514 mRNA 0.40 6 32950539 32954131

Neighbor

gene id symbol gene type direction distance location
XLOC_012886 olfcg2 coding upstream 26570 32916351 ~ 32923910 (+)
XLOC_012885 NA coding upstream 37879 32906489 ~ 32912601 (+)
XLOC_012884 NA coding upstream 53118 32896576 ~ 32897362 (+)
XLOC_012883 olfcg1 coding upstream 102736 32844439 ~ 32847744 (+)
XLOC_012882 olfcg6 coding upstream 145675 32801603 ~ 32804805 (+)
XLOC_012888 olfcg4 coding downstream 23375 32979166 ~ 32982171 (+)
XLOC_012889 olfcg5 coding downstream 36855 32992646 ~ 32995792 (+)
XLOC_012890 olfch1 coding downstream 41046 32996837 ~ 33000125 (+)
XLOC_012891 olfcj1 coding downstream 54037 33009828 ~ 33013057 (+)
XLOC_012892 CU929403.1 coding downstream 76412 33032203 ~ 33036740 (+)
XLOC_012878 NA non-coding upstream 413035 32536584 ~ 32537445 (+)
XLOC_012877 BX908401.1 non-coding upstream 493037 32456046 ~ 32457443 (+)
XLOC_012875 NA non-coding upstream 587298 32180071 ~ 32363182 (+)
XLOC_012896 NA non-coding downstream 209822 33165613 ~ 33168091 (+)
XLOC_012909 BX649633.1 non-coding downstream 487473 33443264 ~ 33444257 (+)
XLOC_012918 CR405715.1 non-coding downstream 667126 33622917 ~ 33626850 (+)
XLOC_012922 NA non-coding downstream 769785 33725576 ~ 33731615 (+)
XLOC_012923 CU463109.2 non-coding downstream 779544 33735335 ~ 33747115 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000109_00777939_00781691 OLFCG5, OLFCG4, OLFCG3, OLFCG2, OLFCG1 coding CI01000109 null 777931 ~ 781806 (-)