Gene
RNA
| Item | Value |
|---|---|
| gene id | G454826 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000320 |
| NCBI id | null |
| chromosome length | 3894707 |
| location | 1667914 ~ 1668228 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU522218 | False | 272 | lncRNA | 0.35 | 3 | 1667914 | 1668228 |
| TU522219 | True | 268 | lncRNA | 0.35 | 3 | 1667914 | 1668228 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000320_01453536_01456193 | ME-T, NTL, TA | coding | downstream | 211637 | 1453156 ~ 1456277 (-) |
| CI01000320_01426753_01430603 | NA | coding | downstream | 237260 | 1426176 ~ 1430654 (-) |
| CI01000320_01394827_01394991 | NA | coding | downstream | 271815 | 1394798 ~ 1396099 (-) |
| CI01000320_01345762_01346867 | NA | coding | downstream | 321047 | 1345662 ~ 1346867 (-) |
| CI01000320_01338270_01341123 | SH3BGRL3 | coding | downstream | 324640 | 1336279 ~ 1343274 (-) |
| CI01000320_01719471_01731780 | NA | coding | upstream | 51078 | 1719306 ~ 1731876 (-) |
| CI01000320_01896359_01898516 | NA | coding | upstream | 227596 | 1895824 ~ 1898516 (-) |
| CI01000320_01914015_01916289 | NA | coding | upstream | 245076 | 1913304 ~ 1916289 (-) |
| CI01000320_01996579_02046284 | NA | coding | upstream | 328130 | 1996358 ~ 2046284 (-) |
| CI01000320_02054421_02068560 | PHACTR4A | coding | upstream | 386183 | 2054411 ~ 2068560 (-) |
| G454825 | NA | non-coding | downstream | 3351 | 1664364 ~ 1664563 (-) |
| G454824 | NA | non-coding | downstream | 4129 | 1663539 ~ 1663785 (-) |
| G454823 | NA | non-coding | downstream | 11765 | 1655947 ~ 1656149 (-) |
| G454817 | NA | non-coding | downstream | 33275 | 1629238 ~ 1634639 (-) |
| G454753 | NA | non-coding | downstream | 68293 | 1596825 ~ 1599621 (-) |
| G454830 | NA | non-coding | upstream | 8071 | 1676299 ~ 1689008 (-) |
| G454837 | NA | non-coding | upstream | 23239 | 1691467 ~ 1691741 (-) |
| G454840 | NA | non-coding | upstream | 33912 | 1702140 ~ 1702371 (-) |
| G454851 | NA | non-coding | upstream | 54744 | 1722972 ~ 1723709 (-) |
| G454942 | NA | non-coding | upstream | 200761 | 1868989 ~ 1869218 (-) |
| G454686 | NA | other | downstream | 526034 | 1141242 ~ 1141880 (-) |
| G454663 | NA | other | downstream | 612019 | 1051468 ~ 1055895 (-) |
| G454495 | NA | other | downstream | 1139362 | 527059 ~ 528552 (-) |
| G456317 | NA | other | upstream | 1975009 | 3643237 ~ 3648040 (-) |
