XLOC_013654


Basic Information

Item Value
gene id XLOC_013654
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 47906641 ~ 47907669 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027436
GTCTTTCTTGTCTCCGTGATCTAACAGAGCGAATGAAGAGTTTCCATTGGAGGGCAGAAGGGTCTTTGGGGCCATTAATCAGTCCTGAGACAAAGGCACGCGCTGCACCTCTGGTCTGTCTCAGCACCGCATGGCTCTGACCCAAATAAAGCTCTCATTGATCCAGAAGAGCCCCCTGTAATCCCTCAGGATTACAGTCAGCTGAAAGTAACCGATATATTTGCAAACAGAGAGCCACTTACATTAAGGTCATTTTCTCCAGGaggaaggaaaataaatggatggagATGAATACTGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027436 True 298 lncRNA 0.47 2 47906641 47907669

Neighbor

gene id symbol gene type direction distance location
XLOC_013653 NA coding downstream 20555 47881952 ~ 47886086 (-)
XLOC_013652 NA coding downstream 28762 47874535 ~ 47877879 (-)
XLOC_013651 KIRREL3 coding downstream 243945 47534181 ~ 47662696 (-)
XLOC_013650 NA coding downstream 372949 47522973 ~ 47533692 (-)
XLOC_013649 CABZ01112464.1 coding downstream 402747 47503777 ~ 47503894 (-)
XLOC_013655 NA coding upstream 278887 48186556 ~ 48193086 (-)
XLOC_013656 ets1 coding upstream 371533 48279202 ~ 48296793 (-)
XLOC_013657 kcnj1a.6 coding upstream 583338 48491007 ~ 48500545 (-)
XLOC_013658 kcnj1a.2 coding upstream 590697 48498366 ~ 48530221 (-)
XLOC_013659 kcnj1a.4 coding upstream 599406 48507075 ~ 48508585 (-)
XLOC_013384 BX323829.1 misc downstream 28364410 19542102 ~ 19542231 (-)
XLOC_013648 NA non-coding downstream 547551 47337003 ~ 47359090 (-)
XLOC_013647 CU633933.1 non-coding downstream 577390 47283187 ~ 47329251 (-)
XLOC_013662 NA non-coding upstream 664238 48571907 ~ 48687718 (-)
XLOC_013665 NA non-coding upstream 1043340 48951009 ~ 48951722 (-)
XLOC_013668 NA non-coding upstream 1210784 49118453 ~ 49121935 (-)
XLOC_013669 NA non-coding upstream 1217159 49124828 ~ 49127340 (-)

Expression


Co-expression Network