XLOC_013665



Basic Information


Item Value
gene id XLOC_013665
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 48951009 ~ 48951722 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00027440
GCTGGCTATAGGCCTGAGATACAATAGTCTGCAGTGATTATCAGACTCAGTGCACATATTAAATCTTTTATTGCCATCAGTCTTGAATCACAGATGTATTTTCAATGACCACATCTCTATCACATGGTTTCTCCTCACGGATGCAGGTGGGATTTATTGTCTTTGTTGACTCGTCCACCTGGGGGGCACAACAGAGTTTCTCCACACACTCCTGCCCACAGCGCAGACTGCAGCCGGGAGAT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00027440 True 242 lncRNA 0.47 2 48951009 48951722

Neighbor


gene id symbol gene type direction distance location
XLOC_013664 tirap coding downstream 195972 48753162 ~ 48755037 (-)
XLOC_013663 st3gal4 coding downstream 205492 48696094 ~ 48745517 (-)
XLOC_013662 NA coding downstream 263291 48571907 ~ 48687718 (-)
XLOC_013661 kcnj1a.1 coding downstream 392589 48542900 ~ 48558420 (-)
XLOC_013660 kcnj1a.3 coding downstream 433969 48515579 ~ 48517040 (-)
XLOC_013666 FO681288.3 coding upstream 27401 48979123 ~ 48992363 (-)
XLOC_013667 BX663503.3 coding upstream 49703 49001425 ~ 49116382 (-)
XLOC_013668 NA coding upstream 166731 49118453 ~ 49121935 (-)
XLOC_013669 NA coding upstream 173106 49124828 ~ 49127340 (-)
XLOC_013670 NA coding upstream 174443 49126165 ~ 49126750 (-)
XLOC_013384 BX323829.1 misc downstream 29408778 19542102 ~ 19542231 (-)
XLOC_013655 NA non-coding downstream 757923 48186556 ~ 48193086 (-)
XLOC_013654 NA non-coding downstream 1043340 47906641 ~ 47907669 (-)
XLOC_013653 NA non-coding downstream 1064923 47881952 ~ 47886086 (-)
XLOC_013652 NA non-coding downstream 1073130 47874535 ~ 47877879 (-)
XLOC_013673 NA non-coding upstream 509547 49461269 ~ 49669012 (-)
XLOC_013674 NA non-coding upstream 597852 49549574 ~ 49551498 (-)
XLOC_013658 kcnj1a.2 coding downstream 420788 48498366 ~ 48530221 (-)

Expression



Co-expression Network