XLOC_013668


Basic Information

Item Value
gene id XLOC_013668
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 49118453 ~ 49121935 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026996
TCCATTCCTGATCTGAAGCCCAGAGTAAAACCAGCACAGAATAGCAGATGATGAAGGACTGAAGAAGGACTCTCCATTCATGCTGTGAAATATGACTCCTCTGGACATCACACACATGGACTCATACACACATGAGCTTCAGTCAGGGAAGAGAGGAAAACACGCAGCGTGTGTGAAGAACAGGAGTATGAGTCAGGAGGACGAGCTTGTGCATCAGCCCAGAGATGTGGATACTCCAGCAGCTCCTGTGCTTAAGGAAGCTCCGGTGTCAGAAACAGACAGAAAAGAGCCCGCAGAGAGAGTTTTCTGCCTGATTGGGGTCACCGCTATCATCCTCAATCTTCTAGTGTGGTGTTAGTCTACATTTACACCCCTGTGTGAAGAGAAGTTCATTACTGGACACCCAACACTAACCTTCAGACATCTGGACGTCCTCACTGCAGAAATGGAGGCTGCGTTTGTTTTTGTGAGCGGCCTGGGAATATACAGTACACATCATCTGCATTTGACTTGACAAATCAATGATGTTTAGAGATAAGCGTTAAAAATCATCTCTCGGTATGAATGTTATCAATTTTCTACATGCTGTTTTCTATGCATACTCTTCTACAATGTAATAagagagtttttgtcttgtttctagtccaaatatctaaagattcAATAATCagaaagcattttctagacaagcaaaacgattattgtcttgttttcagtttttttctaccttaaaacaagctaaataatctgtcaataGGCTAAAATGGTCTTGTCTTCGCTTTGACAAAAGCTTATTTTAATTGCCCCACTAGAAgactagtttgtttattttaaggaaaaactcacttaattttgactctgaaatgaGGACAATAATTTTGggttgtctagaaaatgcttcttgatttaggaatttttagatatttggacaagaaacaagacaaaaaacttTAAGAAAAGACAATggagagaaagaggaaaacatCACAACTGATTTCGAGCTTTTCACTTTCCTGTAAGTTGATTATAATACACCATGGAATAATAAAGGCCTCAATGACATCATGCTCAGAAAGTGACATCATTTTGGAGGGAAAATCACTGTGCTTTATCTGCCTTTGACATAACAAGTCAATGATGTTTAGAGATGGAAATCTGGTTAGCATTTAAAACGATCTCACAATAAGAGCGTTATCATtttctgtgtgttgtttttttttgcatgcgtGCTCTTCTAAAGATGAAATGAATATCAACTCCTGTTTGGGACtttcctgttatttacttgtaatataacattaaataataaaggCCCCAATGACATCATACACAGAAAGTGACATCATTTTGAAGGAAAAATTGCTGTGCTTCCTCTGCTTTTGACGTTATAAATCAATGAATATCAGATTAGCATTTAAAATGATCTCCCACTTTGAATGTTATCGTTTTCTACGTGCTGTTTTCTAAGTGCATTCTCTTctaaaagtaaatgaaaatataCAACTTGTGTGTCAAACTTTGCACTTTCCTGTTAATTGCTTGTAAtat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026996 True 1548 lncRNA 0.37 2 49118453 49121935

Neighbor

gene id symbol gene type direction distance location
XLOC_013667 BX663503.3 coding downstream 2071 49001425 ~ 49116382 (-)
XLOC_013666 FO681288.3 coding downstream 126090 48979123 ~ 48992363 (-)
XLOC_013665 NA coding downstream 166731 48951009 ~ 48951722 (-)
XLOC_013664 tirap coding downstream 363416 48753162 ~ 48755037 (-)
XLOC_013663 st3gal4 coding downstream 372936 48696094 ~ 48745517 (-)
XLOC_013669 NA coding upstream 2893 49124828 ~ 49127340 (-)
XLOC_013670 NA coding upstream 4230 49126165 ~ 49126750 (-)
XLOC_013671 si:zfos-464b6.2 coding upstream 152054 49273989 ~ 49286521 (-)
XLOC_013672 sb:cb81 coding upstream 188018 49309953 ~ 49318823 (-)
XLOC_013673 NA coding upstream 339334 49461269 ~ 49669012 (-)
XLOC_013384 BX323829.1 misc downstream 29576222 19542102 ~ 19542231 (-)
XLOC_013662 NA non-coding downstream 430735 48571907 ~ 48687718 (-)
XLOC_013655 NA non-coding downstream 925367 48186556 ~ 48193086 (-)
XLOC_013654 NA non-coding downstream 1210784 47906641 ~ 47907669 (-)
XLOC_013653 NA non-coding downstream 1232367 47881952 ~ 47886086 (-)
XLOC_013674 NA non-coding upstream 427639 49549574 ~ 49551498 (-)
XLOC_013675 NA non-coding upstream 675999 49797934 ~ 49877562 (-)

Expression


Co-expression Network