CI01180000_01865632_01870994


Basic Information

Item Value
gene id CI01180000_01865632_01870994
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 1865509 ~ 1871089 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_01865632_01870994.mRNA
AAAATATAATGACAGATTTTTAAGTATGATGTTACATTTTTTAATGTTGATTGTTGACTTTTAAGCATGATCTATCTAAAAGTTACATTTTTCCTTGTCTTGTATAGGGCTCTGTACATCCAATATGAATGGGGTCAACGCCAACCCTGACACTCAGGTTGGGAATGAAGAGAGGGGCATTTGGCATAAACGCCTGCGTCTCAGGAAGTCCTCCTTTTCATTCCCCGCTGAACAAAACACTGTGAAAGAGGAGGAGAATGTTACAGCACTTGGACAGAAGGAAACAAAGAAGTCCAAGAAAGGACGGCTGGCGGTGAACACATTCATCTGCTCTGCATGCAACGACGGCATCTCCTTTAGACCTGCCGAATTAATGATGCATTTTAAGATTGTCCACGGAGGCAAAGGAAACCCACCGATGTTTCCATGCAACGTGTGCGGTTTCTCCACGCCAGTGTTCACTACGCTTCAGCAGCACCGAATGCATCACAAGGATGGTTTGTTCACTTGTGAGATTTGTAATGACAACGTCCAGCAAACACTGCCCCAACTAACCAAACATTGTCAAACTCACCATTCTCTGAATGGTCAATACTACTGTCAAAAATGCAAGCTCTCCATCCAGGAGATTGAGCAGTTTGTATGTCACTCATGTTCACCACCAATCGTAAGCAATCATGAAGAAAGCATTACTAATGGTAAGTTGGGGCCGGCACAGAAAAACAATCTTCTAAAGCACATGGCTGCTGCATGCCGTCAAAGGTGGAGCAGAAGAAATTGGTGGAGAAAACAGACACAAGCCTGCAAGAAAGACAGTAACCCGTCCCAAGAGTTTAAGTTCTTGCTTCCAAAACCAGAACCTCAATGGGCATCTCAATTATTACCATTATCCACACCTGGTCTACTGGACAACCAAGGCATGTTGTTGGATCCAGAGAAGACCTTGGAGGAAACACAGCAGTTTCTTGAAAGGACAGTTTGTAGTGGTAAAAAGTGGCCTGCATCTCTCAAAAGTGAGCATGATCTTGTGCCGACTACACCCTGTCCGTCAAAACTGAATGCAAAGCAATGTAGCACGCCACACCCAGGCCTGCAGCGCACTGGGAAAGATAAGCTAACCGGACTTATGGAGAAGAACAATATATCTGTTCCCCCAGATTGCACTACAAAGGTGGTCGGGTTCAAGATGGTGGACGGCAGAAAGCATTTAGTTCTCAAAGTCATTCCTTCAAACAAGCAAGACACTTTGACTCCAGTGGAATCGAATTGTGTTGAATCTCACACTGTGAAACCAACCAATCAACAAGATGAATCCAATGATATTTCAACTGTTAATGCCTCAGGAAACTGTTCTCATGCTCAGGTGACATCTAGAAGGTCTTCGTCCCAAAGAAAGAAGCAGGAACGATGTGTAGCTCAGAGGAACTTTTTGTCTTCAGTGGTTGAAAGGATAAAAAGCCAACAAAAAGATGGCTGCAACAATCAGGAACCTACCGAATGCAATACATCCATTAATCTTGACGCCTTCAACCTCACAAAGAGACTGCGTTCTTGTGCTGAGGTGCATATTCAAAGTCCCCGTGCAAAGAGAGCGAAAGACTGCCAAGACAAAACCCTCAGTGAATCAGAGGAAAACTTTACCGCATGCCAAGGAGATTCAGGCTGTCATAGTGATCTGACCTCGGATACGGGTTCTGTGGAAGAGAGGTGTAGTTCACGACTCCTTACGGCGGCGTTTGATAAAGAACACAATCTTACACTAGACTCAAACATCATTCGGCTTCATTCAAACACAGATTCTTGCTCAATCTCAGGGTTTGATTGCATTAGTCCGTCCTCTAGATCTCCCCTGAAGGATTTGACTGAGTCTTTGTGTCATTTTCAAAGTGAAGATGAGGGCCTGTTATTCCACAGCCATGCCGACAAGTGCACAAACAACATGGACCCCAGAGATTCCCTGGTCCCGGTAGGTCAGCACGACTGTGAGAGGGAAAACTTCAGCGCTCCAGACCTGTATCAGACGGTGGATGAGCTGCCTTTAACAACAATCAGCCATTTGCTGGATGAAGTGGGAGCGGATCGGACGTTATCTTCACACAACGGCTCTGATGAACCTCTGCAAGATTTAGCACGCACCGGAGGTACAAACCAGCAATCTGATCCAGTCGACACCAGCATCCTCTTTCCTGATGATTCAAACTCTTCCACATGTGTACCAGCAACCGGTTCCATTGAGTCACACGGCCCTCTTGCATCACTGAACAGAAAGCGCATGGGAGAAACGTCCTCAGCGGACTCTCACAGACCCGTCAGTAAATCCCAGAAGCGATCGACTCGGGCCTCCGAAGACGTCACAGCATCCGTCCTCCACTGGGAACCGGTGGCTCGAGACGTTCCGACGACCCTTCGACTGATTCCCTACAGCTCCTCACAATCCGTTCAAATCCCACGTGATAACCAGCCTGTTATAGTTCTCAACCATCCCGACACTGATATTCCCGAGGTGACAAACATCATGAAAGTCGTTCACAAGCACAAAGGAGCCGTGCAACGGGTCGTACTGTCTCGTAAAACTCTCCGAGCGCTCTCAGATTTTAACTGCGACGCCTTCCGGAATAACCTCATCACCAATTGCCATGCGTCCCACTGCAGGAGAGAATGGCCAAATGGGACTGTTAAGGAAAGGTTCAGCTTGAAACTGAGGCTCAAAAGGGTGTGTGGAAGAAAGTATACCGTGGTACCAACACCATCAGAAAGCATTGTGCTACAGCCAACGTTTCGATGCTGGTTTTGCGGCCGGCTTTTTAGAAACCAAGAAGCTTGGGTAGGACACGGACAAAGACATCTAATGGAAGCAACCAGAGGCTGGAACCAGCTCTTTAACAGATAGGAGAACTGCATTCACACGGCAGGGACGTTTTTCTGCACTAGCCATTTTTAAGAAGTGCTGTGAATCAGGGTTACTATGCAAATCTCAGGGTGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_01865632_01870994.mRNA True 2984 mRNA 0.47 2 1865509 1871089

Neighbor

gene id symbol gene type direction distance location
CI01180000_01832263_01834405 COX5B.2, COX5B2, COX5B coding upstream 30510 1832013 ~ 1834999 (+)
CI01180000_01828938_01830221 DNAJC12 coding upstream 34695 1828938 ~ 1830814 (+)
CI01180000_01747067_01755038 GPR137B coding upstream 110252 1747067 ~ 1755257 (+)
CI01180000_01576739_01578505 GNG4 coding upstream 286103 1576739 ~ 1579406 (+)
CI01180000_01542059_01545609 GGPS1 coding upstream 319429 1542059 ~ 1546080 (+)
CI01180000_01915282_01926129 NA coding downstream 43803 1914892 ~ 1926269 (+)
CI01180000_01942458_01949580 NA coding downstream 71038 1942127 ~ 1950647 (+)
CI01180000_02158036_02158965 HS3ST1L1 coding downstream 286261 2157350 ~ 2159222 (+)
CI01180000_02322594_02323609 NA coding downstream 449263 2320352 ~ 2323752 (+)
CI01180000_02362001_02362428 NA coding downstream 490871 2361960 ~ 2363530 (+)
G679080 NA non-coding upstream 56369 1808882 ~ 1809140 (+)
G679077 NA non-coding upstream 57454 1803405 ~ 1808055 (+)
G679072 NA non-coding upstream 85811 1778590 ~ 1779698 (+)
G679052 NA non-coding upstream 88384 1776710 ~ 1777125 (+)
G679069 NA non-coding upstream 99971 1765310 ~ 1765538 (+)
G679160 NA non-coding downstream 159649 2030738 ~ 2031031 (+)
G679165 NA non-coding downstream 180438 2051527 ~ 2061011 (+)
G679202 NA non-coding downstream 227452 2098541 ~ 2098808 (+)
G679204 NA non-coding downstream 228609 2099698 ~ 2106093 (+)
G679050 NA non-coding downstream 250180 2121269 ~ 2127987 (+)
G679076 NA other upstream 66076 1795170 ~ 1799433 (+)
G678946 NA other upstream 309358 1518353 ~ 1612547 (+)
G678637 NA other upstream 709837 1149551 ~ 1155672 (+)
G678751 NA other upstream 799418 1059843 ~ 1066091 (+)
G678440 NA other upstream 1713857 147934 ~ 151652 (+)
G679324 NA other downstream 517778 2388867 ~ 2397360 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 other downstream 818673 2689271 ~ 2693221 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other downstream 1682188 3569165 ~ 3573135 (+)
G680736 NA other downstream 1894602 3765691 ~ 3784441 (+)
G681137 NA other downstream 2912216 4783305 ~ 4785631 (+)

Expression


Co-expression Network