CI01180000_03741295_03752345 (DAPP1)


Basic Information

Item Value
gene id CI01180000_03741295_03752345
gene name DAPP1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 3740496 ~ 3752640 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_03741295_03752345.mRNA
TGTATAAATAAATAAAAACATAATTTAGTACCAAATTATGTGTATGCTACTCTTTTTTTATTCATTATTTTTTGGCATTGTCAAAATTTTGAAAAACATAATAATAGCCTATGCATTTTCTTTTTCAAAATTATTCTTGAGTTTGGAGTAAATGTCATCAGTTCCCACTATTAATTTGACTTATTTTTTATTGTACGGGTCCGCATGCAGTAAAAATAAATGAATAGATGTAAACGTAAATGTAACTGTAAACACTGTATCACTGCGCGACGCCCTAGGAGAATGCGTCCTCTAGCGGAAGGATACAGTATACCTTTTTATATTAACTTTCAAAATCATTTAAGATCAAACAGAAACGGAGAATACATTTTTTTTTTTCAAGGGATGCAGTATAATTAATAAAATAATTAATAAAATCACGGTACAATATAAATTTTATCTTCAGTGCTATTTGAATATGTTGTAACCGTCGTGCCTAACAACTTCAGCCATGATGATTATTCACAAGGGAATTTTTTGTCGCTAGTCAAGTTTTGCCGCGTCGTTTGCGTCATGGTTGAAATGTGGCCAGTCGGGTATAAGAACAAGTGCAAATCAGTACATGGCTCTATATATGTTATATTAATTCAATTAGTGGGCGGATCTCTTCGCAGACTTCCCTGCTTCTGCTGTAGGTTTCGACTGTAGCGCAGGAGCAGCTGTGCGTGAGTTTCACATCGAGCCGAACTGAGATTAGTGCTGAATGACTGACTGACTGACAGCGAGACTGAAAATCTGCTTCAGTCACAGCAGAACAGAAGATGAGCGTCAGTTCAACACGGAGCAGCGGGGAAGAACTCGACGAGCTGGAGTCAGTTAGCTGGTATCATTATGATTTGTCCCGGCACGCAGCTGAAGCTCTTCTCCTTTCGAATGGGGTGGATGGGAATTTTTTACTCCGAAACAGCAACAAGGGTTCTGACTGCTTTGCTTTGTCTGTCCGAGCAAAGGATTCGGTGAAACACTTTCATGTCCGGCGGCAGTTTGGCAGATATGCCTTTGGCTTCAATGAATTCCCTTGCCTTCAGGATTTCTGCAGTCACCTTGCCAATCAGCCTCTGCTAGGCAGCGAGACAGCACAGTCACACTATTTCCTGTTTCACTCTTGTAACCAAGGAAACCTGATAGTGCTACGGTTCCCATACCCACGGCAGGTGGAAGAACCATCTATTTATGAGACGGTGTGTGTGCATACGGCCATGCAGACAGGCCGGCATGAAAATGACCTGGTGCCTAATGCTCCAGCGCTTGGCACAAAAGAGGGTTATCTGGTTAAACAAGGAGCAATTATCAAGGTATGGTTACACAAATTTAAAATTCAAATCAATGTTTGCAGTAAATGCCAGTTACAAACTAATAAGTTTGTAGAGCCGATACGAACCCTGGATCTGACGGAGTGCTCCGCTGTCCAGTTTGACTACAGTCAGGAGAGGGTCAACTGCTTCTGTCTGGTGTTCCCTGAGAGGACGTTTTATTTGTGTGCAAAATCCGGTGCTGAGGCAGACGAATGGATTAAGATACTACGATGGAAACTGAACATCAAAACATCAGACTGGATCGGCGATCGTGACTCTCTTATCCAAATGTCTGATTCCTGAAGGTGCTGAGTTGAATAGCAACTAAGCTACTTCCACCACCTGCCTTAGTTCTTCGATCAGAGGGACTAGCTCCTTCTCAAGGCTGAAGATCAAACCTACATATGAAAGAAAAAATAATTAGGGAAATTAATCATTCAACTGTTATTGGCATGAGCATACAATCAAAGAGGCTCTGTGGCTTTTGTCCTTGTGGAGAGACTCACCTGTGTTGGCATTACTACTTGCGATGAAACTTATCACTAAGGGTAATCGGTTGAACTGTACAATCTGCGAAGGAAATACATAAACGCATAT

Function

symbol description
dapp1 Is expressed in axial mesoderm; chordo neural hinge; and notochord. Orthologous to human DAPP1 (dual adaptor of phosphotyrosine and 3-phosphoinositides 1).

GO: NA

KEGG:

id description
K12229 DAPP1, BAM32; dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_03741295_03752345.mRNA True 1931 mRNA 0.41 8 3740496 3752640

Neighbor

gene id symbol gene type direction distance location
CI01180000_03701881_03732121 ATP10D coding upstream 8373 3701469 ~ 3732123 (+)
CI01180000_03663974_03689344 GABRB1 coding upstream 51024 3663436 ~ 3689472 (+)
CI01180000_03610257_03623051 GABRG1 coding upstream 116354 3609420 ~ 3624142 (+)
CI01180000_03590508_03607430 GABRA2 coding upstream 132721 3590508 ~ 3607775 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 coding upstream 168069 3569165 ~ 3573135 (+)
CI01180000_03757478_03765413 RRH coding downstream 3050 3755690 ~ 3765666 (+)
CI01180000_03798341_03812950 METAP1, AMPM1 coding downstream 45134 3797774 ~ 3813051 (+)
CI01180000_03835051_03839911 EIF4E, EIF4EA, EIF4EB coding downstream 81848 3834488 ~ 3840739 (+)
CI01180000_03874309_03876138 LINGO2B, LINGO2 coding downstream 121571 3874211 ~ 3876824 (+)
CI01180000_03886676_03894240 C22H9ORF72, CLG15H9ORF72, CSGR16H9ORF72, C3H9ORF72, CUNH9ORF72, C1H9ORF72, CLG4H9ORF72 coding downstream 133221 3885861 ~ 3894614 (+)
G680831 NA non-coding upstream 87480 3652738 ~ 3653016 (+)
G680825 NA non-coding upstream 98390 3641887 ~ 3642106 (+)
G680824 NA non-coding upstream 98741 3641460 ~ 3641755 (+)
G680823 NA non-coding upstream 100140 3640067 ~ 3640356 (+)
G680816 NA non-coding upstream 135391 3604748 ~ 3605105 (+)
G680728 NA non-coding downstream 75692 3828332 ~ 3830556 (+)
G680768 NA non-coding downstream 91219 3843859 ~ 3844579 (+)
G680856 NA non-coding downstream 115421 3868061 ~ 3868454 (+)
G680864 NA non-coding downstream 129628 3882268 ~ 3882606 (+)
G680869 NA non-coding downstream 228371 3981011 ~ 3981251 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 other upstream 1045060 2689271 ~ 2693221 (+)
G679324 NA other upstream 1343136 2388867 ~ 2397360 (+)
G679076 NA other upstream 1941063 1795170 ~ 1799433 (+)
G678946 NA other upstream 2184345 1518353 ~ 1612547 (+)
G680736 NA other downstream 13051 3765691 ~ 3784441 (+)
G681137 NA other downstream 1030665 4783305 ~ 4785631 (+)
G681268 NA other downstream 1617770 5370410 ~ 5373762 (+)
G681592 NA other downstream 2720395 6471995 ~ 6478999 (+)
G681686 NA other downstream 2880268 6632908 ~ 6634989 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_005851 dapp1 coding NC_007124.7 CM002897.2 12456412 ~ 12477757 (+)