CI01180000_04417522_04418042


Basic Information

Item Value
gene id CI01180000_04417522_04418042
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 4417522 ~ 4419271 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_04417522_04418042.mRNA
AATGTACGGGAAGGCTAGCTCTGTGTTTCGCTTGAGGCACCATTCCCCTCTAACAGGGGATACGAGCGCCTACTTGCTCTTCAGGAACTGTCTACTGCCCAGGATCATTGAGGCTAAGTACCTGGACATTATGGATGCACAGCGCATGTGAACGCATGCACACTGAGCCTCTGAGCAAAGGACTCTGGGAATTGTATTTCTAAAATGCAAAACTCTGGGAGGAAAAACAAACTGATTCTAGTGTTTAACAGCAGGCATTCTGGTGAAGCACTGAACGAGTAATAGAGTAACAGAACGAGAGATTAGAAAAGAAGGATATTTGAAGACCGAACAAGAGAGGGGGAAGGAAGATGAGATGCCTGTTCAAGACAGAGTAGAAAGACAGACCGCTGTCTGACTGTTTGACTATTGACCTCGGTCAGTCATTGCTTCTCTCATGATCTGAATAGTACACCAAAGCCCCCTCCCCCCTCTCTAGTCTATTTTGATGTATCCATGCATCACGATACAGATCAAACACTTGATTTAGAAGATGTAGGAAACCATCACACTTATTCTCAACAATTGTGCCATGACTAAATTACACGAGTGTCCTCTCCATCTCCGATCATAGTGTTTTTGGACACAAACACAGTTGGTTTTTGAACAAGAGACTGAACTGAATCTGTAGCAATACCTCTTAATGCTGAACACTGACTCGCGCGCACACACACCCAGTGCACAAACTCTCATTTGTCAAGTAAAAAAGCTGTCAATCGCAGATTGCATTTTGGTACATATCAGTGCAAATAAGTAATAATGAAGTGAGCATGGACCAAAAGAATACACTCACCTTATTAGGAAACTGTGTCTCATAGCAATACAGCGGATTATTAGAGGCTATCAATATTTTAGAGTTTTCTAAAGAGAGTTTTCTTTTGAGAGTAATAGACTTCTAGTTTGGATACCCACTGATGTGTTGAGAATGTATCCTAAGCGCTGGGGTTTCAGGGAAAAGGAGAAAAACAAGCAGCATTTCTGTGGACCTTACTCACTGCTGAATGGACTCTGACATTTAAGCTTTGCACATCACAAGACACCACGACTGTGTACCTTCCCCACACACACACACACACACACACACACACACAGAGGCATGATTATAAACAATGCCCAAAAGAAAGGCACTTAAACGCACACAATCATGTCCGTCCTTCTCACAATATATTTAAAACAGAGAAAGCATGCCTTTTATAAGAAATTGAAACTTTTGATTTGTATTACTATTATGTAATTTGTTGTGTTATTATTAAAAGCAACTAGAAATAATGGTCAAATGAAGGTATAGTTCCATTATATCCTTACTTCATAGTTGTTTATAGTTGTTTGCGGTCTTTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_04417522_04418042.mRNA True 1379 mRNA 0.41 2 4417522 4419271

Neighbor

gene id symbol gene type direction distance location
CI01180000_04375200_04414909 SLC4A11 coding upstream 2484 4375200 ~ 4415038 (+)
CI01180000_04302604_04322081 NA coding upstream 95207 4301828 ~ 4324310 (+)
CI01180000_04292374_04295052 CFD coding upstream 122391 4291741 ~ 4295131 (+)
CI01180000_04249587_04251719 FOXI2 coding upstream 165071 4249452 ~ 4252451 (+)
CI01180000_04010876_04029709 LETM1 coding upstream 387416 4010876 ~ 4030106 (+)
CI01180000_04421313_04427512 RPIA coding downstream 95 4419366 ~ 4427512 (+)
CI01180000_04430587_04465372 EIF2AK3 coding downstream 11195 4430466 ~ 4465553 (+)
CI01180000_04469563_04545081 ATRN coding downstream 50292 4469563 ~ 4545081 (+)
CI01180000_04822480_04823397 NOTO coding downstream 403092 4822363 ~ 4823566 (+)
CI01180000_04851137_04855438 EMX1.2, EMX1 coding downstream 431866 4851137 ~ 4855584 (+)
G681040 NA non-coding upstream 23322 4393840 ~ 4394200 (+)
G681039 NA non-coding upstream 24014 4393296 ~ 4393508 (+)
G681038 NA non-coding upstream 25140 4392016 ~ 4392382 (+)
G681037 NA non-coding upstream 60661 4356650 ~ 4356861 (+)
G681173 NA non-coding downstream 335249 4754520 ~ 4754758 (+)
G681174 NA non-coding downstream 338406 4757677 ~ 4758241 (+)
G681179 NA non-coding downstream 353020 4772291 ~ 4772496 (+)
G681183 NA non-coding downstream 355328 4774599 ~ 4774811 (+)
G681137 NA non-coding downstream 364034 4783305 ~ 4785631 (+)
G680736 NA other upstream 633081 3765691 ~ 3784441 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other upstream 845125 3569165 ~ 3573135 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 other upstream 1722086 2689271 ~ 2693221 (+)
G679324 NA other upstream 2020162 2388867 ~ 2397360 (+)
G679076 NA other upstream 2618089 1795170 ~ 1799433 (+)
G681268 NA other downstream 951139 5370410 ~ 5373762 (+)
G681592 NA other downstream 2053764 6471995 ~ 6478999 (+)
G681686 NA other downstream 2213637 6632908 ~ 6634989 (+)
G681667 NA other downstream 2236575 6655846 ~ 6659546 (+)

Expression


Co-expression Network