G681040


Basic Information

Item Value
gene id G681040
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 4393840 ~ 4394200 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU801965
GACAGATTCAACGCCCCTGTTGGCAAGGTCTGAGTATAAAGCCAGTTATTAATGCGTATTTTAAGTAAATTAGACGTGCAACAGTGTACTGATACATTTTATTCCTTAGGCCAACTTTTATGGTAATTTTTGACTTGATTTATTAATGCTGCTTATTGTATATAAAATTACAGAGTCAAGTGCATTGAGTGCTTTTTTCTTTTCCCTTTTAATATAGTTAATTGTGTTGATATTAACCTCATAATAGGTGGCAGCAAGCCTGAAACAAAAGGTGCACACTTTTGTAACTTTATAAACCTGAAAGAGAACAGGAAGTGCTTTTTTCCCAACCGGCCCACAACCAAACATTACCTTGACACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU801965 True 361 lncRNA 0.36 1 4393840 4394200

Neighbor

gene id symbol gene type direction distance location
CI01180000_04302604_04322081 NA coding upstream 71525 4301828 ~ 4324310 (+)
CI01180000_04292374_04295052 CFD coding upstream 98709 4291741 ~ 4295131 (+)
CI01180000_04249587_04251719 FOXI2 coding upstream 141389 4249452 ~ 4252451 (+)
CI01180000_04010876_04029709 LETM1 coding upstream 363734 4010876 ~ 4030106 (+)
CI01180000_03906328_03978950 KIAA1109 coding upstream 413992 3906328 ~ 3979848 (+)
CI01180000_04417522_04418042 NA coding downstream 23322 4417522 ~ 4419271 (+)
CI01180000_04421313_04427512 RPIA coding downstream 25166 4419366 ~ 4427512 (+)
CI01180000_04430587_04465372 EIF2AK3 coding downstream 36266 4430466 ~ 4465553 (+)
CI01180000_04469563_04545081 ATRN coding downstream 75363 4469563 ~ 4545081 (+)
CI01180000_04822480_04823397 NOTO coding downstream 428163 4822363 ~ 4823566 (+)
G681039 NA non-coding upstream 332 4393296 ~ 4393508 (+)
G681038 NA non-coding upstream 1458 4392016 ~ 4392382 (+)
G681037 NA non-coding upstream 36979 4356650 ~ 4356861 (+)
G680984 NA non-coding upstream 166567 4227009 ~ 4227273 (+)
G681173 NA non-coding downstream 360320 4754520 ~ 4754758 (+)
G681174 NA non-coding downstream 363477 4757677 ~ 4758241 (+)
G681179 NA non-coding downstream 378091 4772291 ~ 4772496 (+)
G681183 NA non-coding downstream 380399 4774599 ~ 4774811 (+)
G681137 NA non-coding downstream 389105 4783305 ~ 4785631 (+)
G680736 NA other upstream 609399 3765691 ~ 3784441 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other upstream 821443 3569165 ~ 3573135 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 other upstream 1698404 2689271 ~ 2693221 (+)
G679324 NA other upstream 1996480 2388867 ~ 2397360 (+)
G679076 NA other upstream 2594407 1795170 ~ 1799433 (+)
G681268 NA other downstream 976210 5370410 ~ 5373762 (+)
G681592 NA other downstream 2078835 6471995 ~ 6478999 (+)
G681686 NA other downstream 2238708 6632908 ~ 6634989 (+)
G681667 NA other downstream 2261646 6655846 ~ 6659546 (+)

Expression


Co-expression Network