Gene
RNA
| Item | Value |
|---|---|
| gene id | G681037 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 4356650 ~ 4356861 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU801962 | True | 212 | lncRNA | 0.36 | 1 | 4356650 | 4356861 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01180000_04302604_04322081 | NA | coding | upstream | 34335 | 4301828 ~ 4324310 (+) |
| CI01180000_04292374_04295052 | CFD | coding | upstream | 61519 | 4291741 ~ 4295131 (+) |
| CI01180000_04249587_04251719 | FOXI2 | coding | upstream | 104199 | 4249452 ~ 4252451 (+) |
| CI01180000_04010876_04029709 | LETM1 | coding | upstream | 326544 | 4010876 ~ 4030106 (+) |
| CI01180000_03906328_03978950 | KIAA1109 | coding | upstream | 376802 | 3906328 ~ 3979848 (+) |
| CI01180000_04375200_04414909 | SLC4A11 | coding | downstream | 18339 | 4375200 ~ 4415038 (+) |
| CI01180000_04417522_04418042 | NA | coding | downstream | 60661 | 4417522 ~ 4419271 (+) |
| CI01180000_04421313_04427512 | RPIA | coding | downstream | 62505 | 4419366 ~ 4427512 (+) |
| CI01180000_04430587_04465372 | EIF2AK3 | coding | downstream | 73605 | 4430466 ~ 4465553 (+) |
| CI01180000_04469563_04545081 | ATRN | coding | downstream | 112702 | 4469563 ~ 4545081 (+) |
| G680984 | NA | non-coding | upstream | 129377 | 4227009 ~ 4227273 (+) |
| G680931 | NA | non-coding | upstream | 210233 | 4146138 ~ 4146417 (+) |
| G680929 | NA | non-coding | upstream | 212813 | 4143609 ~ 4143837 (+) |
| G680893 | NA | non-coding | upstream | 281354 | 4075087 ~ 4075296 (+) |
| G681038 | NA | non-coding | downstream | 35155 | 4392016 ~ 4392382 (+) |
| G681039 | NA | non-coding | downstream | 36435 | 4393296 ~ 4393508 (+) |
| G681040 | NA | non-coding | downstream | 36979 | 4393840 ~ 4394200 (+) |
| G681173 | NA | non-coding | downstream | 397659 | 4754520 ~ 4754758 (+) |
| G681174 | NA | non-coding | downstream | 400816 | 4757677 ~ 4758241 (+) |
| G680736 | NA | other | upstream | 572209 | 3765691 ~ 3784441 (+) |
| CI01180000_03571292_03571611 | GNG2.L, GBG2, GNG2 | other | upstream | 784253 | 3569165 ~ 3573135 (+) |
| CI01180000_02690045_02691641 | NKX6-2, NKX6-2.L, NKX6.2 | other | upstream | 1661214 | 2689271 ~ 2693221 (+) |
| G679324 | NA | other | upstream | 1959290 | 2388867 ~ 2397360 (+) |
| G679076 | NA | other | upstream | 2557217 | 1795170 ~ 1799433 (+) |
| G681137 | NA | other | downstream | 426444 | 4783305 ~ 4785631 (+) |
| G681268 | NA | other | downstream | 1013549 | 5370410 ~ 5373762 (+) |
| G681592 | NA | other | downstream | 2116174 | 6471995 ~ 6478999 (+) |
| G681686 | NA | other | downstream | 2276047 | 6632908 ~ 6634989 (+) |
| G681667 | NA | other | downstream | 2298985 | 6655846 ~ 6659546 (+) |
