G679160


Basic Information

Item Value
gene id G679160
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 2030738 ~ 2031031 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU799857
AACTTCAACAACAGAAACTCTTTTAAATGTCAAACATAACAGCATTAAACACTAACAGGTCTTTCCCTTCACTAAAAACAAATAAATTAACACTTAATTTCAACATTTATTCTCATTATCCAGTCCTATGCAAAGCATGCTGGGAACTAGAAATCCACAGCCTAATTTCTGAAATTATCAAGACAATTTTATTAAGTTACTACAACCTAATTTTGTGTTAAAAAACAAACAAAAAAAAGCCAATTAACGCATAAATTTGAGTTTAAATTACAGAGGATATTAAGTGGATGTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU799857 True 294 lncRNA 0.28 1 2030738 2031031

Neighbor

gene id symbol gene type direction distance location
CI01180000_01942458_01949580 NA coding upstream 80091 1942127 ~ 1950647 (+)
CI01180000_01915282_01926129 NA coding upstream 104469 1914892 ~ 1926269 (+)
CI01180000_01865632_01870994 NA coding upstream 159649 1865509 ~ 1871089 (+)
CI01180000_01832263_01834405 COX5B.2, COX5B2, COX5B coding upstream 195739 1832013 ~ 1834999 (+)
CI01180000_01828938_01830221 DNAJC12 coding upstream 199924 1828938 ~ 1830814 (+)
CI01180000_02158036_02158965 HS3ST1L1 coding downstream 126319 2157350 ~ 2159222 (+)
CI01180000_02322594_02323609 NA coding downstream 289321 2320352 ~ 2323752 (+)
CI01180000_02362001_02362428 NA coding downstream 330929 2361960 ~ 2363530 (+)
CI01180000_02541296_02567509 CFAP46 coding downstream 510265 2541296 ~ 2567783 (+)
CI01180000_02574027_02588521 NA coding downstream 542996 2574027 ~ 2588824 (+)
G679080 NA non-coding upstream 221598 1808882 ~ 1809140 (+)
G679077 NA non-coding upstream 222683 1803405 ~ 1808055 (+)
G679072 NA non-coding upstream 251040 1778590 ~ 1779698 (+)
G679052 NA non-coding upstream 253613 1776710 ~ 1777125 (+)
G679069 NA non-coding upstream 265200 1765310 ~ 1765538 (+)
G679165 NA non-coding downstream 20496 2051527 ~ 2061011 (+)
G679202 NA non-coding downstream 67510 2098541 ~ 2098808 (+)
G679204 NA non-coding downstream 68667 2099698 ~ 2106093 (+)
G679050 NA non-coding downstream 90238 2121269 ~ 2127987 (+)
G679228 NA non-coding downstream 166158 2197189 ~ 2201435 (+)
G679076 NA other upstream 231305 1795170 ~ 1799433 (+)
G678946 NA other upstream 474587 1518353 ~ 1612547 (+)
G678637 NA other upstream 875066 1149551 ~ 1155672 (+)
G678751 NA other upstream 964647 1059843 ~ 1066091 (+)
G678440 NA other upstream 1879086 147934 ~ 151652 (+)
G679324 NA other downstream 357836 2388867 ~ 2397360 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 other downstream 658731 2689271 ~ 2693221 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other downstream 1522246 3569165 ~ 3573135 (+)
G680736 NA other downstream 1734660 3765691 ~ 3784441 (+)
G681137 NA other downstream 2752274 4783305 ~ 4785631 (+)

Expression


Co-expression Network