Gene
RNA
| Item | Value |
|---|---|
| gene id | G683135 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 4739510 ~ 4739998 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU804341 | True | 489 | lncRNA | 0.42 | 1 | 4739510 | 4739998 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01180000_04567468_04575805 | GFRA4, GFRA4A | coding | downstream | 163705 | 4567235 ~ 4575805 (-) |
| CI01180000_04554549_04560819 | NA | coding | downstream | 177738 | 4553441 ~ 4561772 (-) |
| CI01180000_04327538_04335433 | NA | coding | downstream | 403121 | 4327360 ~ 4336389 (-) |
| CI01180000_04131891_04133055 | NA | coding | downstream | 606374 | 4130958 ~ 4133136 (-) |
| CI01180000_04082957_04114030 | FGFR3 | coding | downstream | 625480 | 4082648 ~ 4114030 (-) |
| CI01180000_04780398_04786371 | AP5S1 | coding | upstream | 39900 | 4779898 ~ 4786371 (-) |
| CI01180000_04790491_04793557 | NA | coding | upstream | 49540 | 4789538 ~ 4793664 (-) |
| CI01180000_04796238_04797552 | NA | coding | upstream | 56178 | 4796176 ~ 4797842 (-) |
| CI01180000_04833972_04834223 | NA | coding | upstream | 93006 | 4833004 ~ 4836841 (-) |
| CI01180000_04863395_04878213 | NA | coding | upstream | 123050 | 4863048 ~ 4878213 (-) |
| G683022 | NA | non-coding | downstream | 192611 | 4544971 ~ 4546899 (-) |
| G682989 | NA | non-coding | downstream | 310035 | 4428131 ~ 4429475 (-) |
| G682986 | NA | non-coding | downstream | 319478 | 4418008 ~ 4420032 (-) |
| G682987 | NA | non-coding | downstream | 322635 | 4413644 ~ 4416875 (-) |
| G682988 | NA | non-coding | downstream | 329028 | 4410263 ~ 4410482 (-) |
| G683140 | NA | non-coding | upstream | 3485 | 4743483 ~ 4743800 (-) |
| G683203 | NA | non-coding | upstream | 101477 | 4841475 ~ 4841688 (-) |
| G683184 | NA | non-coding | upstream | 116185 | 4856183 ~ 4858174 (-) |
| G683182 | NA | non-coding | upstream | 219204 | 4959202 ~ 4960925 (-) |
| G683183 | NA | non-coding | upstream | 225042 | 4965040 ~ 4965500 (-) |
| CI01180000_03242704_03242928 | YPEL5 | other | downstream | 1494553 | 3241341 ~ 3242929 (-) |
| CI01180000_03016426_03018342 | NA | other | downstream | 1719835 | 3014433 ~ 3018343 (-) |
| CI01180000_02988807_02995955 | NA | other | downstream | 1745646 | 2987081 ~ 2997401 (-) |
| G680506 | NA | other | downstream | 1887594 | 2771047 ~ 2851916 (-) |
| G680525 | NA | other | downstream | 2122754 | 2616354 ~ 2616756 (-) |
| G683394 | NA | other | upstream | 878209 | 5618207 ~ 5619271 (-) |
| G683294 | NA | other | upstream | 1011046 | 5751044 ~ 5755526 (-) |
| G683673 | NA | other | upstream | 2022077 | 6762075 ~ 6762844 (-) |
| G684018 | NA | other | upstream | 2663149 | 7403147 ~ 7413132 (-) |
