XLOC_016653 (si:dkey-57k2.7)


Basic Information

Item Value
gene id XLOC_016653
gene name si:dkey-57k2.7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 37449294 ~ 37458527 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032692
CTACCCCTAATACCATTAAGAGCAGACAATAATCCAGCACCAAATGCCACAAAGTCTAGACTACAAAAGAGACCTCCTGCAGACGCCTCACCATCAACACCTCAGAGACCCAGAGGAAGACCAAAAGGCAGCATGAATAAGAAAGTACAGGAGGGGGCAAGTGTTTCTCCACCAGTGAAACGCAGCAGGAAATTCACAGAGTGTCTTGCTGAATCCCACACTCCAAAACAGAAAAGGCTTAAGTCCAGTCCTCTCCTAAGCTCCACCCCAAGCTCTCATCTCCAACCCCTGACATCAAAAAGAGAAGACAATAATCCAGCACCAAATGCCACAAAGTCTAGACTAGAAAAGAGACCTCCTGCAGACACCTCACCATCAACACCTCAGAGAACCAGAGGAAGATCAAAAGGCAGCACGAATAAGAAAGTACAGGAGGGGGCAAGTGTTTCTCCACCAGTGAAACGCAGCAGGAAGAGCACAGAGTTTCCTGCTGAAATGCAAACTCTGAGTAGTCCTTGCTCTGAAAATCAGGAACCAGAGCCTAATGAGTCGGATCAAACCATGTCCTCTGACCTGTCCATTGAGCTGAGCCTGCATGAGGATCCTCATCTTCTTAACCACTCACTCTTCATGCAAGAGGAGAAAGATGATCaggatgatgatgacgatgacgaGGAGCTGCCCAGCTTTTTGGGGCAGGACAGTAAAAAGCCTTTGTCGATCTCAGAGGGACTTTGTGTGTGGTGCAAAATGTGGAAATACCCTTACTGGCCTGCGGTGGTTAAAAGTGTAAATCGCAAGAACAAAAAAGCCAGCATTATATTTATCGATTGTGACCTCAGTGACCAAAAAAGAGCTAAGAAAGGGTTTACTGTGTCTCTGAGAAACTTAAAACCGTTTGATTGTGAGGACTATGAAAAATTGGTGGATATGGCAAAAGAGAAGTATGGCAGTGCTATAACCTGGTCTGTTGAACTGATTTCAGACTACAGAATCCGCATTGGTTGTGGATCTTTTTCTGGCTCCTTCATTGAATATTGTGCTGCTGACATCAGTTGCCCGGTCAGAAGGAAGTACTCTGAGGGAAAATCTGTGCTGACCTTTCCTAGTCAGGAGATTCTGGGTGAGAAATGTGACATCTCTGAAAATAGTGCAGAGGACATCTGTGCAGAAGACCAAGATGAGCTCCTTTCGCAGAAAAGGAACCTGCCTGACCGAGCCAAGGCAGCACGTACCCGTGCCAACGAGCAGTTGGTGGACTTCATAATCAGAGGAAAAGTTGAAAACCATTTGCTGGCCATCATCAGCGAGTCATCTGCATGGATGCAAGCCCTCCAGAAGCCTTTTCGGCAGGTGGTTTGCCCAGTCCTCTATTTGGAGGACGAGGGGCAGGTTGATAAGGTGTACCAGTATCTGCATGATCTCTGTGAAACTGCACCTCAAATAAACACCTCTCCAGAAAACGTCCAGGTGGTCCGGGTCCGCCTCATTCTAGATGTGCTTCTGCCTAAGGCCATTATCTATGCCATTGCCGGAGTCCACAATCTTTCCCTGGAGAAGGCCGAGGAGAAGTATCACAAAGGGCCACGTTTTAGTAACAGAGAAAGACAAGAGTTTGACATGATGATCGAACGCCAGATGAAGCTTAAGGAAATCACACAGCGTCATAGACGGTGACTGCCTtctgtttttaatgaaacatgatttttttaaagaaacatgagaAACATGTGGATGTTGTTATTTAAGAAGCCTTCATTTAACCAGTATCAAGGAAATCAGTTTAATTATGGGTGAATTccacagcaaaataaaattaGCTTTGTATATAAATTAACTTGGTCATAATCTGTTTTATACTTGCTGCTTATAATGTGTGCAGTGTGTATGACTAACTGTTTGTGCTACacataaatacaatattttaataatactaataataatttggCTGTTATTTGTAAGAGATCATAGCAAAATGTTGCATTTACAATTACTCACCCGACAGATTAAAATAACATAGCACATtgatgctttttttgtttttgttttttactgcaTCTTTGTTCTGGTCTAATGTACATAGTGATTTTATACAGGACTTCATTGGTGTTTAtcaataaatctttatttttcaaCACA
>TCONS_00032693
TTAAAAGTGTAAATCGCAAGAACAAAAAAGCCAGCATTATATTTATCGATTGTGACCTCAGTGACCAAAAAAGAGCTAAGAAAGGGTTTACTGTGTCTCTGAGAAACTTAAAACCGTTTGATTGTGAGGACTATGAAAAATTGGTGGATATGGCAAAAGAGAAGTATGGCAGTGCTATAACCTGGTCTGTTGAACTGATTTCAGACTACAGAATCCGCATTGGTATTTATTTAGTTTCCTCCTTTTAGAAGTGCATTTAAACatcttaaaggtgccatagagtgcattgattcagtatgttaaaatgtaaaatatttacattgtaGGTATGTGATTTGGGTAAGTTAAAACATTGTCCACAAATGATTTTATAAGCTCATTTATAACAAAAGCAATATCccccagaatgaaaacaaatcaGTTTTGATCGTATTTGCAATGGGTTTAATATTAATTAGCTTTGCTCCGCAGCTTGTGTCAGTGcctgctctctttctctctctctctctctcacacacacacacacacacacacacacacacacacacacacacacacacacacagtgtgacaTACTACATACATAGTACAAgcttaaataaatctaaaaatatggaacaaaaaatattattgttttaatctcACTAGGAAATGATGTGGCCTGTCAAATGCAGCCTtg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000060395

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032692 False 2139 mRNA 0.43 13 37449294 37458527
TCONS_00032693 True 679 lncRNA 0.35 3 37454533 37455482

Neighbor

gene id symbol gene type direction distance location
XLOC_016652 NA coding downstream 32829 37413404 ~ 37416465 (-)
XLOC_016651 BX511231.1 coding downstream 40137 37405351 ~ 37409157 (-)
XLOC_016650 prkci coding downstream 47694 37365551 ~ 37401600 (-)
XLOC_016649 skila coding downstream 96196 37307326 ~ 37353098 (-)
XLOC_016648 nadkb coding downstream 167546 37267241 ~ 37281748 (-)
XLOC_016654 si:dkey-57k2.7 coding upstream 2113 37460640 ~ 37462462 (-)
XLOC_016655 si:dkey-57k2.6 coding upstream 4889 37463416 ~ 37465517 (-)
XLOC_016656 dapk3 coding upstream 11049 37469576 ~ 37478418 (-)
XLOC_016657 arhgef18a coding upstream 45717 37504244 ~ 37537904 (-)
XLOC_016658 insra coding upstream 86424 37544951 ~ 37632896 (-)
XLOC_016646 NA non-coding downstream 276469 37171808 ~ 37172825 (-)
XLOC_016645 NA non-coding downstream 291694 37157201 ~ 37157600 (-)
XLOC_016644 NA non-coding downstream 293503 37153759 ~ 37155791 (-)
XLOC_016662 NA non-coding upstream 355136 37813663 ~ 37815373 (-)
XLOC_016680 NA non-coding upstream 685635 38144162 ~ 38145701 (-)
XLOC_016681 NA non-coding upstream 734432 38192959 ~ 38194479 (-)
XLOC_016694 BX248328.1 non-coding upstream 1912284 39370811 ~ 39370927 (-)
XLOC_016697 NA non-coding upstream 2151794 39610321 ~ 39612464 (-)

Expression


Co-expression Network