XLOC_016672 (cbln9)


Basic Information

Item Value
gene id XLOC_016672
gene name cbln9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 37963266 ~ 37967368 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032728
AGTTAGTACGCTACACCATTACGAGACAGAACAATACATAATGTTGCTTTTTATAACAATCCTAATGTTCAATGTTTGGACCACAATGGCAGCAAGTTTATTTTCACCAAATATAAACATCATTGAAGAACTGGAAAAATTTAAAATCATGGAAACAAAGATCAAATCCATGGAGCAGAAAATTGAGCAACTAAAAGCAGAAAATGCAGGAAGGGTGAAAGTAGCCTTTTCAACCTCACTGTCAGATTCATCGGGTATGATATATATCGGCCCTTTTGCACAGGAAACTGATCTTGTGTATAATAAAGTATTTACCAACATTGGAAATGCATATGATTGTGAtacagGAATATTTACTGCCCCAGTAAAAGGAGTTTATTTCTTCAACCTTGTGCTCTTCACAAATGATGCCGTATCAGCCGGGGTGAAACTGCTAAGGAATGGTAAACTTGTGATTGCAGTGACAGATAACCCCCCTGCAAAAAACGGAGACTATGAGGACACAGCGAGCAACTCGGTCAGTCTTCTTTTGGAAGAAGGGGACCAAATAAGCCTAAAACTCTTGGAGAACCGTCGTATCTACACAGATGGGTTCAAACGTAACACCTTTAGTGGACACCTTCTTTTTACTATCTAAAGTTGTATGTATTAAGATACAATAAGAAGCAAAATCTAAAGCTGAGAAgtgaaaaaaagctttaaattcaATGACGCAAAAATATGAAAGTATATGACAAAAATAAGTGACAAATACGTTTGCAAACATGCACTTCTGTCTGTTaattattactaataaataaaaactttcattGTCAA

Function

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040724-34 No description available

Ensembl:

ensembl_id ENSDARG00000030254

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032728 True 816 mRNA 0.36 3 37963266 37967368

Neighbor

gene id symbol gene type direction distance location
XLOC_016671 cbln14 coding downstream 2578 37959040 ~ 37960688 (-)
XLOC_016670 cbln10 coding downstream 6498 37953571 ~ 37956768 (-)
XLOC_016669 zmp:0000000729 coding downstream 66301 37894849 ~ 37896965 (-)
XLOC_016668 hbl2 coding downstream 69356 37892606 ~ 37893910 (-)
XLOC_016667 mbl2 coding downstream 74114 37887277 ~ 37889152 (-)
XLOC_016673 pcp4l1 coding upstream 27808 37995176 ~ 38000276 (-)
XLOC_016674 cbln5 coding upstream 66957 38034325 ~ 38035235 (-)
XLOC_016675 tox4a coding upstream 100701 38068069 ~ 38080075 (-)
XLOC_016676 chd8 coding upstream 120045 38087413 ~ 38117538 (-)
XLOC_016677 cbln12 coding upstream 154047 38121415 ~ 38125657 (-)
XLOC_016662 NA non-coding downstream 147893 37813663 ~ 37815373 (-)
XLOC_016652 NA non-coding downstream 546801 37413404 ~ 37416465 (-)
XLOC_016651 BX511231.1 non-coding downstream 554109 37405351 ~ 37409157 (-)
XLOC_016646 NA non-coding downstream 790441 37171808 ~ 37172825 (-)
XLOC_016645 NA non-coding downstream 805666 37157201 ~ 37157600 (-)
XLOC_016680 NA non-coding upstream 176794 38144162 ~ 38145701 (-)
XLOC_016681 NA non-coding upstream 225591 38192959 ~ 38194479 (-)
XLOC_016694 BX248328.1 non-coding upstream 1403443 39370811 ~ 39370927 (-)
XLOC_016697 NA non-coding upstream 1642953 39610321 ~ 39612464 (-)
XLOC_016699 NA non-coding upstream 1859336 39826704 ~ 39827511 (-)

Expression


Co-expression Network