XLOC_017095 (CEP170B)


Basic Information

Item Value
gene id XLOC_017095
gene name CEP170B
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 3108597 ~ 3130881 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034119
AAGCACCGGTGGCGGCGCTGGACGCAGATGCCATGACAGCATGATCTGTCTAACGCGAGAGGGTGTTGTCTTCACAGCCACACCACTGACGAGCCTGCGACCTTATAACTGGATTTCATAAAATAACATCTTGTGGCTGAGGATGCGCATATAACATTATATCGTAGCTATTGCGGAAAGCAAGAAGAACACGTTTCATTGGGTTCTTCGAGAGAGATCAGTGCGTCTGTAGGATGCAAAAAAGATTTCTCTGAGAAACAAAGATGAGTGTGACATCATGGTTTTTGGTCAGCAGCTCTGGCACTCGTCACCGACTGCCTCGGGAAATGATCTTTGTTGGCCGGGAGGACTGTGAGCTCATGCTGCAGTCTCGGAGTGTAGATAAACAGCATGCTGTTATCAACTATAACCCTGCCACAGATGAGCACCTCGTCAAGGACCTTGGAAGTTTAAATGGGACTTTTGTCAATGACTTGAGAATTCCCGACCAAACATATATAACCCTCAAGCTGTCAGACATTGTTCGTTTTGGATATGATTCACATGTGTATATTCTTGAGAGGAGTCAACATAAAGTCCCTGAGGAGGCACTCAAGCACGAGAAGTACACCAGTCAGCTACAGATGGGCATCAAATGTGAAGAGGGAAAACAGCAGAATGTGCAAGAGGAAAAGTCTAAATTAGAGCGCTCTGATCGTAAGAGTCTCACAGAATCCCCTGTACCCCGACCAACACCACTGTATGGCCAGCCATCATGGTGGGGTGAGGAGGACTCTGGGAACATGGAAAACAGTGAAGTACGAAGGTCAAGTGACAATCATTCAGACATCACAAAGGAGATCCACACAGCAGAGGATGATTTTAACCTTCAGGAGATCCATGATGGCCAGGCAAAGTCAACGTACCTGTATAACAGAGAGCCCAGCTACTTTGAAATTCCAACTAAGGAGTTTCACGTGCAACACAAGTCGCCAACGACAGACTTGATTGACATCCCAACCAAAGATACAAATGTTTCTCTGATCTCCACACCACCAGTTGTCCAAAGTCATGCTTCCTTTACTATCGAGTTTGACGATTGCATGCCAGGAAAGATTAAAATCAAGGATCATGTGACCAAGTTCTCGTCCCGTCAACGTAGCAAACAGCAGCAGCCCGGTAATACTCTGGCAGCCACTCCCACGGAGGTTTTGTCAGCTGAGAGCAAGGTGGCGGATTGGCTCGTGCAGAGCGATGTCAGCATGATGTGCAGGAGGACACCCTGTGAGGACGTATACAGCACTAAGAGTGACTTGGCGATGCATATTCGGACACTCAAAGGACACCATCATGACGATGGAACCCAGAGTGATTCTGAAGACCCTGTGATGAAAGGAAAATGCAGCAAGTCACATCATTCCATGCAATCAGTACAATCATACCACTCAACTCAATCGAAGACATCCGAACCATCAGAATCACTTTTGTCCCAGCAGTCTGTCATACCACAAAAATCCCATAATCCACAAACACTCCCACAACACAAACACCACCAAGTAAAGCTTGATGAAAGCGAAGATCGTCCCATCCAAGAAGGCTCCTCTCCTCCTAGAACAGAGGTCGAGCCCAGTCACACTGAGCCTCACACTCAACAGGCCTTCATTATCGAGTTTTTTGATGATAATCCCAGAAAGAAGCGATCGCAGTCCTTTACCCACAATTCTGTGCATGCTGACTCCTACTCTGCACTGAAGGCCAAACTAGAGAGGCGCAAAGGTCTGGCTCATGGAGAAAGGCCCGCCTCGGTGCATGGACTTGTTCCTCCAACACAGCAAATCACTGTTCCCCTGAAAGGAGCAAGCCATGGAGGTTCACAGCGATCAAGCTCCTTGAAAAGGGAGAAGACAGAAGACACTGGGAGCAGCTCATCCCTATTAGGGAGCTCCTCTCGCTCTTCACCAACTATCACCATTAAGCCTTTTGGAAGCATGGGTAAAAATTCAAAACTAGCTCAGGAATTTACAGAAGAATTCTCCAAGGATACTGGAAAGATTTTCTTACCACCTAAGTCTGCTCCACCAGTGATGATGTCCCCATCACACACTCCTTCATCCTCCCTGGCAGAGACCTCTGGACATGTATCTGTATCATATCCATCTTCTCCGTGCCAGCACTCTGCATTGCCCCAGTCTCTTCTCTCAGCATCATCGCCTGTCTCTGCTCCTTCCCACATCCCTGGAAGGAGTCCGGTTTTTAGTGCCTCACCAGTCTGCTCATCGGTGCCCCAAGTTTCACCACAGGTAGTTAGCTGTGTTGACACGAAGGCATCAAGGGTAACGCGAACCGAAGAGGAGGACAGTCTGAGTGATGCTGGTACCTACACAATTGAGACTGAGTCACAAGATAAGGAAGTGGAAGAAGCTAGAAGTATGATTGACcagGTGTTTGGTGTTTTAGATGCGCCAGAATACAGTGGTCAGACTCTTGGAGTTTATAGGCCTGTGATTGATGATGGGGACAATGAGCAGCTATTCTTTAGTCAAAGCCACAGTAATGCAGCTGATGTAATGTCAACATCATCATTGGGCCATGGCAGGGACCAAGTCATCTCATTGCAGGCACATCCTGGTGTAGTAGGGCCTAAATGGGTCTCGCGTTGGGCCAGCCTTGCAGACCCTTATAGTGATCCCGGGGCTACACAAGGATCTGTACCAGTTCCACCCCAAAGTGCAGAAAGAGATGACAGAGTGACATTAATTATTGGTCAATGCTTGGATATCTCAGAATCAGAGGGAAGTCAAAGTTCCAGGACCAGACGGCTACTTCCTCAGGTTCCTCCTGGAGAAAAACTAGAAAACACAACCCCTAGCATCCTAATCCGACATGAAACAAACTTGGACCATGAGCCACCAGAGAAAGGTTCCAGAATGCCACAGCAGCAAGACAACACTCAGAGGCTACGTGTCCAGGATGATGTGGACCCAGACAGTCTGAGTGACACCAGCCGTTCAGATGACAGCTCTATCCTTGATAGAAGCGGTAGGAGCCAAGGAAAACGAGGAACTACAAGACACCTACCTTCAGAAAATGTAAACCATTCAAGAGAGCTGAGGGAGATGCCACAACCTACACCCAAACCCACTTCATTTTATATCGGTTCTGAGGATGGTTTATCCAAGTCCGATGTGTCCAAAAGCCCAGTTCTTTCACAGCCAGAGAAAGACTCTGCTTTCAAGATACCTCCAACTACTGTCTTGATACGACATTTGAGTGGCCATGAGTCTAGACGTCCAGTGAAACCCAACTCATCAGCTCCAGATCTTCAGACACATAACAAGGATGTGGTGCCCACCAAAGATACTTCAACCTCATTTGTTCGACAGGAGAGTTTTACCAAAGACAGGCCAAGTGACAACATTCAAGTCAAGAAACTGCCACATATCTCTAGTCATCCTGCTTTGCGAAGCTTGGATACAGAGGAGACACTTCAAGATACATTTACCTTTCTTAAGGAAGTAGAGAAATCTCCAGAGGAGAAGTTGTCTGGATGTAGTCAACGATCAAAAAAAGGAAGCTCTCCTGCACAAGAAGACTCCTTTTCTGGTGACTCAGATGTGGATACTGCCAGTACTGTAAGCATGGTCAGCAGTAAAAATGCCCCTGTCAGTTCACTTAAGAAGCACACGTCTGCAAATGACACGGGTAAGGAGAAGTCATCATCTGGTTTACCTGCAAAACACAAAGCACGACAACCCACAGCTCGCGAACGACTGTCAGAGAAACGCAAAAGTCATGCCTCTGCAGATAACACCAGTAAAGCTGAACTAAGTCGTCGGCTCCAGCTTCGCCGCAGTGCTGGCAATCGTGGTTCGTTAGACCTTTCAGATAATCAGCATGGTCAGCAGCTATGGCCTGAAGCGGGTGCTTCCGACCATGAGTCAAGTTCACGGCCAAACAACCGTAAAAAACTCACTGCTCCCCTGCAGAAGGAGGACCCCAATAAGGTGACCAAAGGAAGCCATCAGGTGCTGACCAGATCCAACAGTCTTTCAGCCCCAAGACCAACACGTGCCTCCATGCTCCGCCGAGCTCGACTAGGTGAGGCTTCAGATAATGAGAGCGCTGAGACAGACCGGGCATCTCCAAGCTCTGAGCACAGCAAGACAGAATCGAAAAAACTCTCAAGGCTAGACATTCTTGCCATGCCTCGGAAACGCACAAGGTCCTTCACTGTTCCAAGTGACAATGAGTCAACTTCAAGTAAGCATGGCATTTCTAACCGTACTACAGAGGCAAGTAGCAGTGCAAGGAAAGGTGCTTCAAGTGAGGTGAGGCATGCTAACAGCAAAGGGACTGCAGCAGCTGGGAAACACTCCTCCCGTACCCATTCTACCCAAGTTAAACACAGTAGCACAGCTGGCTCCCACCGTAGACAAAGGGATTCTGACTATTCCTCAACCTCAGAGGAAGAGTTTGAGACTAAGACCAACTGTAAACAAAAACGGTCCCATGCATCAGCTTCAACTCAGACACAGACTCCGCAGAAGACCGCGCAAATGAGGCTAAAATGTGGCTCTTTGGAAACAGAAGAGGATGAAACTCAGAACGAACACTTCCAGAACTGGTCAACTCATAGCGCAGAGATTGCCAGGCTAAGTCAAGATCTTGCTAAAGATCTTGCCATTCTTGCTCGTGAAATCCATGATGTAGCAGGCGATGGTGATTCCCAGGCATCCTCAGGCATAGGAGCTACCACTTCCCCAGTCTCCATGCCCAATACCCCTGCATCCACTATCTCAACCAGAGAGGAGCTGGTACAGCATATACCCGAGGCAAGTTTGAACTATCAAAAGGTTCCTCCAGGCTCAACTAGTCCAATAGACCAGGACTCAAATATGAACGACCATGACAGTTCCAGACGGCGTCCCTGGAACCGTGAAGAGGTAATACTGGACAATCTCATGTTGAATCCAGTTTCCCAGCTCTCCCAGGCTATCAGGGAGAACACGGAGCAACTAGCTGAGAAAATGAAAGTTCTGTTTCACAATAAGACCGAGGTCTGGGAGGAAATAGAGGCAAAAATTAATGCTGAAAATGAAGTTCCAATCATTAAGACATCTAATAAGGAAATTTCATCTATTCTTCAAGAACTGCGAAGGGTCCAAAGACAACTGGAGGtgatcaacaCTATTGTTGAGCCTGGTGGGATCCTCAAGATGCCCCCTAAGGTAACTTCTGGGGGAAAGATCAAGTCTGCTCCCAAGGAGTTTACCAGCTCCTCTTCTACTAATGCCAATGCAAGTGCTAAGCAAGGCCCCAGAGGGTCTGGAGGAGGGCGATATGTATAGGTAATATCTCTTTGGAGACTCAaagtatatttgtatattattggAAGACTAAATGTGGTGCAAATATGcatcacatgtttgtttttttttaaagactggaCACACTTTAAGCTAAAGTAGGCAGTAAACATTTCAACAGCTGTAATCAGTGGCTTGCTTGAAAGATTGTCATGAATACCATGTTGTCATTCATGATTGAGTGAATCAGTCAGTGTTGTGTTGCTGTATTACTGTACCAGTTCACACTGGTGTTACTGTAGCATTGGATTCATGGTCATTGTCAATCATGTAATGCACTTGGCTGCTACAAACCTACAGCATGACAAAAGGCTGAGTACACAGTACATGGCACAGCCGTTAGCTTGCTTTACAAAAAACCAATCATTTGTTTAAGGCAGTCAGTTAATAGTTGATAACTGAATCTCTTTTACTTTTGAGAAATTGACTACTAATTCTCAGACATAGCAagttaaaaagtaatacatttttttggtataaattataattaaggCTAAATTGTGATCATACAATGCAAAAAAaggttaattaacagtttcctgtAGTCGTGTCCTGATGTGAttaatgggtgttttccagtcatTTAAGCtttgaaattttaattttgtaatataaagtacacacactcacatacatatatatata
>TCONS_00034120
ATGAGTGTGACATCATGGTTTTTGGTCAGCAGCTCTGGCACTCGTCACCGACTGCCTCGGGAAATGATCTTTGTTGGCCGGGAGGACTGTGAGCTCATGCTGCAGTCTCGGAGTGTAGATAAACAGCATGCTGTTATCAACTATAACCCTGCCACAGATGAGCACCTCGTCAAGGACCTTGGAAGTTTAAATGGGACTTTTGTCAATGACTTGAGAATTCCCGACCAAACATATATAACCCTCAAGCTGTCAGACATTGTTCGTTTTGGATATGATATCCTTTTTTTCTGGTGA

Function

symbol description
cep170b Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human CEP170B (centrosomal protein 170B).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-131127-515 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human CEP170B (centrosomal protein 170B).

Ensembl:

ensembl_id ENSDARG00000078327

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034119 False 5990 mRNA 0.46 19 3108597 3130881
TCONS_00034120 True 294 mRNA 0.46 3 3111932 3112937

Neighbor

gene id symbol gene type direction distance location
XLOC_017094 amd1 coding upstream 129629 2950005 ~ 2978968 (+)
XLOC_017093 CABZ01027815.1 coding upstream 199932 2908551 ~ 2908665 (+)
XLOC_017092 syncrip coding upstream 363212 2731436 ~ 2745385 (+)
XLOC_017091 slc35a1 coding upstream 428914 2669017 ~ 2679683 (+)
XLOC_017090 zgc:101562 coding upstream 461031 2642855 ~ 2647566 (+)
XLOC_017096 ndufaf7 coding downstream 146739 3277620 ~ 3288089 (+)
XLOC_017097 NA coding downstream 181781 3312662 ~ 3315637 (+)
XLOC_017098 mfsd4b coding downstream 208367 3339248 ~ 3345526 (+)
XLOC_017099 LO018608.1 coding downstream 272766 3403647 ~ 3416581 (+)
XLOC_017100 C20H1orf198 coding downstream 785525 3916406 ~ 3927624 (+)
XLOC_017088 NA non-coding upstream 600502 2506900 ~ 2508095 (+)
XLOC_017087 NA non-coding upstream 626782 2480910 ~ 2481815 (+)
XLOC_017085 NA non-coding upstream 823784 2281624 ~ 2284813 (+)
XLOC_017084 BX681416.1 non-coding upstream 841985 2261933 ~ 2266612 (+)
XLOC_017107 CABZ01067980.1 non-coding downstream 1173576 4304457 ~ 4307735 (+)
XLOC_017108 CABZ01067979.1 non-coding downstream 1178640 4309521 ~ 4318473 (+)
XLOC_017113 BX649499.2 non-coding downstream 1920308 5051189 ~ 5057952 (+)

Expression


Co-expression Network