XLOC_017096 (ndufaf7)


Basic Information

Item Value
gene id XLOC_017096
gene name ndufaf7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 3277620 ~ 3288089 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034121
ATAATAAAGGACTTGGAGCAGCATGTTGCAGGTTGTCTATGCTGTGCGTCAGTGTTGTCACTCATCATCAACGCTGAATGATATTTACATGTAATAAAGCGTTAATGACAGCACTATGAGGACTCTTCTGAGACTGAAGCGGCTGATGCCAGAAGTGCTTTGGACGAAACGATCATGCTCCAGCTCTTCCATCAACAAATCCATCCTTAAACATCTCGCATCCAAAATCATTGCCACGGGTCCAATTTCAGTGGCTGAATACATGAGGGAAGCACTCACCAATCCGGTGTTGggATATTATGTGAAAAATGACATGCTCGGAGCAGGTGGTGATTTTATTACATCACCAGAGATTAGTCAGATTTTTGGCGAGCTTTTAGGAGTTTGGTGCATCAGTGAGTGGATGGCGGCTGGGAAATCCAGTGCGCTGCAGTTAGTGGAGCTCGGACCAGGTCGAGGTTCATTGACCAGTGACATCCTGAGGGTCTTCAGTCAGTTGAAAGGTGTCCTGGGCGAGACTGGGATCTCCATTCATCTTGTGGAGGTCAGCCCAAAGTTAAGCCAAGTTCAGGCTGAATGTCTTACTGGAAATCAGACGCAGACATATGACAACAATCACACTTTTTACCGCAGTGGCACTACATGTACAGGCCTGCCTATATACTGGTATCACAGCATAGAGGACGTCCCAAGAGGTTTCAGCATTTTTCTTGCCCATGAGTTTTTTGACGCTCTTCCCATTCACAAGTTTCAGAGAACGGAGAACGGCTGGCGGGAGGTGCTGGTTGATATTGATCCTGAAAACCCAGGAAAATTGAGATTTGTGGTTTCTCATCGTCCTACCCTGGCCTCCAGCACTCTTATACAGAAAGATGAAAGCAGACGGCACGTGGAAGTGTGTGCTGAGGCTGGAGTCATCGTTCAGAAGCTGGCCAGTCGGATCGCAGAGGACGGAGGCGCAGCCTTAATTGTAGACTATGGGCATGATGGGACAAAAACTGACACTTTCAGAGGTTTTAAAGGCCATCAAATCCATGATGTATTGGAGGCACCCGGCCTGGCAGATTTGACCGCAGATGTGGACTTCAGCTACCTGAGGAAAATGGCAGGTGACCAGGTGATCTGCTTGGGACCCATCACACAGAGATCTTTCTTGAAAAACATGGGCATTGACTCCCGTATGCAGGTTCTACTGAGCAGTAATGACCCGTCCATCAGAGCCCAGCTCATCCACAGCTATGACATGCTGATCAACCCTGAGAAAATGGGTGAGCGGTTCCAGTTTTTCTCTGTGCTCAACACGGCTCGGCTGGCTCAGAGAGAACAAATGCAGAAGAGTACAGTGATGCCTGTGGCAGGATTTACTGAGCTGGAGATGCAATGAAAAGATCTTCTGCTACTAATATGCATGGACTGTACTGATTGTCTGGTTTGTCACAAATCACACAGTAAAACgtttatatattatgttttattgtgtGATTCGTCTTCCCTATTTACAGTCAAGTATAGTTTCTTATCAGAAATTATCGCATTTGTCAATTATACAATCGATTACACAAGAGGTTCTCGTTGCTTGTCCTCCGGACCCACCActcattttatacatattttcctgtataaaacatttaaatctgTTTAACTGAA
>TCONS_00034122
GTGTTGTCACTCATCATCAACGCTGAATGATATTTACATGTAATAAAGCGTTAATGACAGCACTATGAGGACTCTTCTGAGACTGAAGCGGCTGATGCCAGAAGTGCTTTGGACGAAACGATCATGCTCCAGCTCTTCCATCAACAAATCCATCCTTAAACATCTCGCATCCAAAATCATTGCCACGGGTCCAATTTCAGTGGCTGAATACATGAGGGAAGCACTCACCAATCCGGTGTTGggATATTATGTGAAAAATGACATGCTCGGAGCAGGTGGTGATTTTATTACATCACCAGAGATTAGTCAGATTTTTGGCGAGCTTTTAGGAGTTTGGTGCATCAGTGAGTGGATGGCGGCTGGGAAATCCAGTGCGCTGCAGTTAGTGGAGCTCGGACCAGGTCGAGGTTCATTGACCAGTGACATCCTGAGGAAAGATGAAAGCAGACGGCACGTGGAAGTGTGTGCTGAGGCTGGAGTCATCGTTCAGAAGCTGGCCAGTCGGATCGCAGAGGACGGAGGCGCAGCCTTAATTGTAGACTATGGGCATGATGGGACAAAAACTGACACTTTCAGAGGTTTTAAAGGCCATCAAATCCATGATGTATTGGAGGCACCCGGCCTGGCAGATTTGACCGCAGATGTGGACTTCAGCTACCTGAGGAAAATGGCAGGTGACCAGGTGATCTGCTTGGGACCCATCACACAGAGATCTTTCTTGAAAAACATGGGCATTGACTCCCGTATGCAGGTTCTACTGAGCAGTAATGACCCGTCCATCAGAGCCCAGCTCATCCACAGCTATGACATGCTGATCAACCCTGAGAAAATGGGTGAGCGGTTCCAGTTTTTCTCTGTGCTCAACACGGCTCGGC

Function

symbol description
ndufaf7 Predicted to enable protein-arginine omega-N symmetric methyltransferase activity. Involved in mitochondrial respiratory chain complex I assembly. Acts upstream of or within chordate embryonic development. Predicted to be active in mitochondrion. Orthologous to human NDUFAF7 (NADH:ubiquinone oxidoreductase complex assembly factor 7).

GO:

id name namespace
GO:0043009 chordate embryonic development biological_process
GO:0032981 mitochondrial respiratory chain complex I assembly biological_process
GO:0032259 methylation biological_process
GO:0005739 mitochondrion cellular_component
GO:0035243 protein-arginine omega-N symmetric methyltransferase activity molecular_function
GO:0016740 transferase activity molecular_function
GO:0008168 methyltransferase activity molecular_function

KEGG:

id description
ko04714 Thermogenesis
ko03029 Mitochondrial biogenesis

ZFIN:

id description
ZDB-GENE-060929-628 Predicted to enable protein-arginine omega-N symmetric methyltransferase activity. Involved in mitochondrial respiratory chain complex I assembly. Acts upstream of or within chordate embryonic development. Predicted to be active in mitochondrion. Orthologous to human NDUFAF7 (NADH:ubiquinone oxidoreductase complex assembly factor 7).

Ensembl:

ensembl_id ENSDARG00000033134

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034121 False 1647 mRNA 0.46 10 3277620 3288089
TCONS_00034122 True 875 mRNA 0.49 7 3277671 3287752

Neighbor

gene id symbol gene type direction distance location
XLOC_017095 CEP170B coding upstream 146739 3108597 ~ 3130881 (+)
XLOC_017094 amd1 coding upstream 298652 2950005 ~ 2978968 (+)
XLOC_017093 CABZ01027815.1 coding upstream 368955 2908551 ~ 2908665 (+)
XLOC_017092 syncrip coding upstream 532235 2731436 ~ 2745385 (+)
XLOC_017091 slc35a1 coding upstream 597937 2669017 ~ 2679683 (+)
XLOC_017097 NA coding downstream 24573 3312662 ~ 3315637 (+)
XLOC_017098 mfsd4b coding downstream 51159 3339248 ~ 3345526 (+)
XLOC_017099 LO018608.1 coding downstream 115558 3403647 ~ 3416581 (+)
XLOC_017100 C20H1orf198 coding downstream 628317 3916406 ~ 3927624 (+)
XLOC_017101 clec11a coding downstream 646427 3934516 ~ 3940286 (+)
XLOC_017088 NA non-coding upstream 769525 2506900 ~ 2508095 (+)
XLOC_017087 NA non-coding upstream 795805 2480910 ~ 2481815 (+)
XLOC_017085 NA non-coding upstream 992807 2281624 ~ 2284813 (+)
XLOC_017084 BX681416.1 non-coding upstream 1011008 2261933 ~ 2266612 (+)
XLOC_017107 CABZ01067980.1 non-coding downstream 1016368 4304457 ~ 4307735 (+)
XLOC_017108 CABZ01067979.1 non-coding downstream 1021432 4309521 ~ 4318473 (+)
XLOC_017113 BX649499.2 non-coding downstream 1763100 5051189 ~ 5057952 (+)

Expression


Co-expression Network