XLOC_017867


Basic Information

Item Value
gene id XLOC_017867
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 4381929 ~ 4386307 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036446
GAAGAAATGTATAGGCAATTATATTaggcaattatttaaataaaaaaagaacagactGAGCAATTAATGCGCGTCACAAATGCGTCATCACGATCGTTTTTCACCCACTAGCCTACAATGAGTCCACATTAGACGTCTTCAAACTCTGCTCAGATTCCCCCAGAAAAACCTGTTGTATTTCGTGTGTGTGGACTACACGTAGAGCAGACCTGATGCTGAATACCGTCGAATGGGGTTTGAATTATTGAACTGAAGAGCTGATGATCATTTCTGCCCTCTAGTGGAATCCACACACTGCTCCATCTCCGACAGGACTAATCAAGAAAGAAGGTACGTTTACATTTTGATGTTATAGAAGGGTAGAGCAGGAGTAACAAACAGTACTATAGCACAATGCTTTCATTATAAGAAATGCCATATATTAGTTTGTTGTTATCAAGTGTTTGTAATGGAGTATTCATATATACAgttggcatgggccggtataagattatgatggtatgataaccttattggataaaaatatcacggtaattactgctgtaaaatatattctttttaaaaaactttttttccctttga

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036446 True 582 lncRNA 0.37 3 4381929 4386307

Neighbor

gene id symbol gene type direction distance location
XLOC_017866 zgc:194224 coding downstream 224791 4149523 ~ 4157138 (-)
XLOC_017865 NA coding downstream 235797 4135534 ~ 4146132 (-)
XLOC_017864 CABZ01042336.1 coding downstream 255675 4126140 ~ 4126254 (-)
XLOC_017863 sprtn coding downstream 332067 4033193 ~ 4049862 (-)
XLOC_017862 fam89a coding downstream 350454 4026408 ~ 4031475 (-)
XLOC_017868 CABZ01032982.1 coding upstream 19630 4405937 ~ 4407228 (-)
XLOC_017869 NA coding upstream 108834 4495141 ~ 4496142 (-)
XLOC_017870 papola coding upstream 326469 4712776 ~ 4738133 (-)
XLOC_017871 ak7a coding upstream 356093 4742400 ~ 4766649 (-)
XLOC_017872 galca coding upstream 383455 4769762 ~ 4793450 (-)
XLOC_017928 CU539064.1 misc upstream 5667098 10053405 ~ 10053701 (-)
XLOC_017860 NA non-coding downstream 428298 3942667 ~ 3953631 (-)
XLOC_017859 NA non-coding downstream 466159 3913424 ~ 3915770 (-)
XLOC_017857 NA non-coding downstream 655003 3721325 ~ 3726926 (-)
XLOC_017875 BX649499.1 non-coding upstream 519771 4906078 ~ 4907477 (-)
XLOC_017876 NA non-coding upstream 682505 5068812 ~ 5070190 (-)
XLOC_017882 CABZ01045949.1 non-coding upstream 934908 5321215 ~ 5321329 (-)
XLOC_017885 BX088548.1 non-coding upstream 1227572 5613879 ~ 5613996 (-)

Expression


Co-expression Network