XLOC_017869


Basic Information

Item Value
gene id XLOC_017869
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 4495141 ~ 4496142 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036792
GGAGAGGTCGCTTACCTGTAATTACTCCATGATTTGCTGCCCTCATTGGGAACGCGGCCAGCTTTTCTATACTTTTATGAGGATTTTTTTGTGCGTTTCTTGTGGTCGCCGTGTTGCAATTAAAGCCGTCTCCGAGCTTTTGGGTGGCAAAGGCGCTGAGACAGACACAACTCGAAAGGAACGTCTCGCTGCAGGCACCATGAAAAAGCATGGGATGAGAAAAGCACAGTTAATTACGCTTGACAGTTGTTTGCAATAACAGGTCATCCCCGCAAGACTTTTTCCACTCAGACTTTGATGTGGGATCCGCACGTCGGCCGCCGAGGCGCCTGTGATGGAAGACTGTGCCAAATCGGACCTTATCTCTTCTCATCCTGTCAACGGTTCGGCTGAACGTAATCACAGGAGCCTCCGTGTGAACCGTTTGGATACAATAAAAGATTTTGGTCACATTAAAGGTATTACGCTTAAGGCCACAGACTTTCACAGGGGTATTTCATGTTAGATGTGTTGAACCCCCACCCTTCACTGTAATAATGTGGGGCCTCCAGTCTGTTTCGTTAAATTGCCTGCACATGCTAAACATTCCAACAAACAACGTTCTTTTAAAGCAAATGGTAGGCAAATCTACCTCACTTTACGGTGTCTGACTAATGATACTACTGTGAAAATATAATCAAGAACACAATATAGTCTTCTCATATGATTATATGTTCCAAAGCTCTTACATTAAACCCAATTTACCCATtggtgtttttattaattattaattatttaaactttacaaGGAAATCATGTGaaaaataat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036792 True 808 lncRNA 0.42 2 4495141 4496142

Neighbor

gene id symbol gene type direction distance location
XLOC_017868 CABZ01032982.1 coding downstream 87913 4405937 ~ 4407228 (-)
XLOC_017867 NA coding downstream 108834 4381929 ~ 4386307 (-)
XLOC_017866 zgc:194224 coding downstream 338003 4149523 ~ 4157138 (-)
XLOC_017865 NA coding downstream 349009 4135534 ~ 4146132 (-)
XLOC_017864 CABZ01042336.1 coding downstream 368887 4126140 ~ 4126254 (-)
XLOC_017870 papola coding upstream 216634 4712776 ~ 4738133 (-)
XLOC_017871 ak7a coding upstream 246258 4742400 ~ 4766649 (-)
XLOC_017872 galca coding upstream 273620 4769762 ~ 4793450 (-)
XLOC_017873 zdhhc14 coding upstream 331593 4827735 ~ 4883673 (-)
XLOC_017874 arid1b coding upstream 401854 4897996 ~ 5052838 (-)
XLOC_017928 CU539064.1 misc upstream 5557263 10053405 ~ 10053701 (-)
XLOC_017860 NA non-coding downstream 541510 3942667 ~ 3953631 (-)
XLOC_017859 NA non-coding downstream 579371 3913424 ~ 3915770 (-)
XLOC_017875 BX649499.1 non-coding upstream 409936 4906078 ~ 4907477 (-)
XLOC_017876 NA non-coding upstream 572670 5068812 ~ 5070190 (-)
XLOC_017882 CABZ01045949.1 non-coding upstream 825073 5321215 ~ 5321329 (-)
XLOC_017885 BX088548.1 non-coding upstream 1117737 5613879 ~ 5613996 (-)
XLOC_017886 CABZ01064253.1 non-coding upstream 1499447 5995589 ~ 5995703 (-)

Expression


Co-expression Network