XLOC_018311



Basic Information


Item Value
gene id XLOC_018311
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 40330106 ~ 40336899 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00036491
tagcatatttagcaaatcagcatattgttATTTGTAAAAGCTCGTATGACACTGAAGAATGAAGTAAATTCAACTATATCACAGGAATAATTTATTAACcatgaaaacaacacaaaacattcattttacaagtaaatattaatttacaatgctGCAGTTTTGACTGTATTTTTATCAAGCAAATATAGCCTTGGTGAGAAGAGATTTACATCCATATGTTACTGATATCAAGATCCTCCTGAAATCTAGATATACAAATGATCTGTTTAAACCGGACACATCAAAACAAAGCTTCTTTTTCTGTtcattttgtcgTGTTTGTCAGCAGCACCAAGCATGTTTGTTTAAAtgataatgttgtttttatgACTA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00036491 True 372 lncRNA 0.30 2 40330106 40336899

Neighbor


gene id symbol gene type direction distance location
XLOC_018310 clvs2 coding downstream 10216 40269891 ~ 40319890 (-)
XLOC_018309 NA coding downstream 75621 40215369 ~ 40254485 (-)
XLOC_018307 nkain2 coding downstream 210234 39806370 ~ 40119872 (-)
XLOC_018308 CR847530.1 coding downstream 409932 39919232 ~ 39920174 (-)
XLOC_018306 rnf217 coding downstream 540260 39749448 ~ 39789846 (-)
XLOC_018312 smpdl3a coding upstream 524 40337423 ~ 40367493 (-)
XLOC_018313 fabp7b coding upstream 32358 40369257 ~ 40370736 (-)
XLOC_018314 pkib coding upstream 34998 40371897 ~ 40451115 (-)
XLOC_018315 hsf2 coding upstream 138677 40475576 ~ 40487284 (-)
XLOC_018316 cx43 coding upstream 378264 40715163 ~ 40720530 (-)
XLOC_017928 CU539064.1 misc downstream 30276405 10053405 ~ 10053701 (-)
XLOC_018305 NA non-coding downstream 583669 39744195 ~ 39746437 (-)
XLOC_018303 BX936317.1 non-coding downstream 643979 39601856 ~ 39686127 (-)
XLOC_018299 NA non-coding downstream 915848 39410844 ~ 39414258 (-)
XLOC_018322 BX510919.2 non-coding upstream 891165 41228064 ~ 41228179 (-)
XLOC_018323 NA non-coding upstream 900805 41237704 ~ 41242669 (-)
XLOC_018324 BX510919.3 non-coding upstream 1015947 41352846 ~ 41352960 (-)
XLOC_018325 NA non-coding upstream 1573671 41910570 ~ 42173191 (-)
XLOC_018328 NA non-coding upstream 1883835 42220734 ~ 42241456 (-)

Expression



Co-expression Network