XLOC_019702


Basic Information

Item Value
gene id XLOC_019702
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 30375700 ~ 30398344 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039665
AATGATTTTCTTGTTAGCTACAGGCGCTTGATGGTTTGGCATAGAAACTGTTACAATCAATTTAAGTGGATTTCAACAGAAAATGTTTGTATATCGAGAGTTCGACAATATCACTAACGTTTTGTGGCGGAAGCTAAAAGTCAGGGGggcctatgtgtgcacgtgcttGCTAAGAGTCAAACATCAAAAGGCGTCCTGAAGGAAACCCGTGGGACTGGTGCTGATCTATAGGGGTAGAGAGCTGGGATATAGGGGTCCGACAAGCGATCAACGAAAATGAGGCATGCCGGGGCAGGACATGTGGCACAGAGAGAGttcgtTGACATACCTGTCgaactaactggacaaactggtaacagtgggaaagcag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039665 True 370 lncRNA 0.46 3 30375700 30398344

Neighbor

gene id symbol gene type direction distance location
XLOC_019701 slbp2 coding downstream 82114 30288570 ~ 30293586 (-)
XLOC_019700 FAM53C coding downstream 91296 30256952 ~ 30284404 (-)
XLOC_019699 dnajc18 coding downstream 121515 30239549 ~ 30254185 (-)
XLOC_019698 NA coding downstream 183032 30185865 ~ 30192668 (-)
XLOC_019697 hnrnph1l coding downstream 193936 30169610 ~ 30181764 (-)
XLOC_019703 NA coding upstream 3440 30401784 ~ 30409204 (-)
XLOC_019704 grpel2 coding upstream 11990 30410334 ~ 30415524 (-)
XLOC_019705 afap1l1b coding upstream 19690 30418034 ~ 30467905 (-)
XLOC_019706 rab39ba coding upstream 142121 30540465 ~ 30545121 (-)
XLOC_019707 NA coding upstream 177917 30576261 ~ 30583032 (-)
XLOC_019695 BX510945.1 non-coding downstream 242917 30132668 ~ 30132783 (-)
XLOC_019689 CU855895.1 non-coding downstream 372790 29998561 ~ 30002910 (-)
XLOC_019685 CR762480.2 non-coding downstream 395942 29733436 ~ 29979758 (-)
XLOC_019709 NA non-coding upstream 252721 30651065 ~ 30658560 (-)
XLOC_019712 NA non-coding upstream 394311 30792655 ~ 30794590 (-)
XLOC_019714 BX936320.1 non-coding upstream 487783 30886127 ~ 30888374 (-)
XLOC_019686 NA non-coding downstream 621150 29753220 ~ 29754550 (-)

Expression


Co-expression Network