LOC110527154 (LOC106576753)


Basic Information

Item Value
gene id LOC110527154
gene name LOC106576753
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 65898427 ~ 65911535 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021608300.2
tgtgtgtgtgtgtgtgtgtgtgtgagcgagagaccCGTGTAACACTACTCGGATCTGCACACGGAGGACTAGTTGGTTTGGACACTTGAGTTACAGGCGCTCAGAACACCATGACGTGCGCAAGGAGTCAGGTGCAAACGGCGAGTGCGCTCGGTTGCATGGTCTTCACGATAACTCCAGTCGGTCAGATCTCTCTCAGAAGGATAATAACAAAAGAATGCTAATAATAGCGGCCAAACACTTTGACGACGTATTGACTCCTATATTGGATTTAGAGAGGGATAAAGCATGATGGTTGTATAAGGAACGGGTGCCTTTTGGCGCTGTATAAATCGCAGAAGGTGCCTTTTTCAGTACTTTACAAACACCTGTCAACAATTGGAAGATGAAGTTTGGGAAGAGCATCTGTATCCTTAATGTGGGTGGCACAAAATATGCGTTCCCTAAGGATGTGATAAAGGATTTCCCTCTGAGCAGAGTGAGCCGTTTGCACAAATGCGCATCGGAGAAAGAAGTACTGGAAGTGTGTGACGACTACGATCGGGAACGGAATGAGTTTTTCTTCGATAGGCACTCGGAGGCTTTTTGTTTCATCATGCTGTACGTGAAGTACGGGAAGCTACGGTTCGTCCCGCAGATGTGCGAGTTATCATTCTATAACGAAATGATTTACTGGGGGCTGGAGAGCTCACACTTGGAGTTTTGCTGCCAGCGGAGACTGGACAATAAGATGTCCGACTCGTACATTCATTTCTCCGAGGAGGAAGTCAAACTCGAGGAAGAGTTGAAGGGCGAGAATTTGATGACTCGCGTGGTCACTGAGAGAGAGGAGTCCAAGTGGCTGGAGAGAATGAGAAGTACTTTTGAGGAGCCGACTTCATCAGTCGCAGCACAAATCCTGGCCTCAGTGTCCGTTATATTTGTTTTAGTGTCCATGGTGATGCTTTGTGTGAGTACTTTGCCAGATTGGAAAACCGCTGAGAACAACAGCGTGGAGGAACACCAATACAATCCAGACTCTTTAGAGCATCCATCCGGGATCATCGAGGCTGTGTGTATCGGCTGGTTCACCGCTGAGTGCATTGTGCGCTTCATCGTGTCGCGGGACAAGTGTGAGTTTGTCAAACGGCCCCTCAACATCATTGACCTACTGGCCATTACACCCTACTACATCTCCATCTCCATGACGATGCTGACAGGGGAGAACTCCCAGCTTCAGCGGGCGGGCGTCACCCTGCGTGTTCTGCGCATGATGCGCATCTTCTGGGTGATCAAGCTGGCCCGACACTTCCTGGGCCTGCAGACTCTGGGGCTAACACTGAGTCGCTGCTACCGGGAAATGGTGATGCTGCTGCTGTTTATCTGCGTGCCTATGGCCATCTTCAGTGCTCTAGCCCAGCTGCTGGAGCATGGCCTGGACCTGGAGTCGCCGAATGAGGACTACGCCAGCATTCCAGCCGCCTGTTGGTGGGTTATTATCTCCATGACCACTGTGGGCTATGGAGACATGTACCCCATCACTGTGCCTGGGCGAGTGCTGGGTGGCCTGTGCGTGGTGAGCGGCATCGTGCTCCTGGCACTGCCCATCACCTTCATCTACCACAGCTTCGTGCAGTGCTACCATGAGCTCAAGTTCCGCTCGGCCCGCTGCACGCGGAGCCTGTCCGCAGAGTTTCTCGACTGAGGGATCCCTGATGTGGCTACTCCCCCTGACAACTCTTCAGAGACCTCCATCCACCCTGGAAGTGTGCATCGATCGGAAACATGACCTCTATCTTTGGTCTCACACtttatttgacacattttttttgatTTATCCCTCGTCTTGGAACATCAGTatgaggggttatgtgttttgAGGTTTGCATATGGCACAGCCTTCTTCAATAGTCAATTCCAAATAGGAAGTAACGGAACCCGATGGGGACAAGGACTGTTTCCACGGCTGCCATGGTGACAGTGGTGTTCGGGGCAGATGTCCCTGACAGGATGTCAGCGTTGGAGGGCAGCTGGATTGTGTCAGACCAGACAGAGGCCTTCATATTACTGTGGATTATACAGAATTTAGCCAGTCTCACAGTACAACCTTCTTCTCACATGGCGACATGCCACAAAAGAGATTTGAGTTTTAATGCAATTTTCAATCCCACACTTCTGGCAATGTCACAGTGTGAGGATGGAAGGTAACATTTCTCTTCTCTTTCATCGATCATTTCTTTCTAGTGTTCCTGTGGCCAGTCAGTGAACAACAATGCATTACCAAGAAACCAAAGCGTATGAGTACAGAGAACACTGTCCCCTTTAATCTTTCACTTCAACGCTCACGCTTCCCCTTTTATTTTGCGTAGGCAAACCTgacaaatataaaaacacaacacTTTGTGAATTTGAATGAGCCCATTTACAACTCAAACAAGGTCACATTCTAAACCTATTAGCCATTCCACCTGAAAACCAAACCAATGCAAAGTGGTTTTGAAAGGTATTTTTTTGCAGAAAccaagagagggggtgggaggggtTGAACAAGAAAGAGTACAGTACCGTATGGGTCTGTCAGCTCAGCTGTGTAGGCAGGTCTTTAATGTGGAACACGGAGCCACAGAGCGAGAGTGTGTCATGGAGAAACTGGTGGTTCGGCTGACATCACACAGTGCAGTAAGGAGAGGGCATGTCTGCCTCAGCCTCGTGAGCGCTGCGGGTCTTCTGACTGGAGGAGTGGAACCATTTGTGGCTGGTGTCAAAACCTTGGTAGCCTCTTCCTGTCACAACAAAGGCACTCGGCACAACCACCACAGCCTTGGTAGGCACTCCTCtcaatgttgttgtctggccCACCCGCTTCTCCTCGACACTCTTTCGACGCCATGTTTGGGTGGCTTGTGTGACGCATTCGGCCTCCTTTCCTGCCAGAGTGAATTTGGGTGTCTCTGAAAAGCTTTTATCATGCCTTCACTAATTTCTTTCGTGGGGAATTGGGAATGGGGTCATTGTGTGTTCTCTTTATATCAGCCGGCTTCAGGCTACACTACCTGTTATTACTAACAAGCACCATCTCTGTTTTCCCAGATTGTGCATAGATGTGTTTGCTCTAGGACTGGGTTTTCGTGTTCGCTAACAGAATTTGTAAATGTAATATTGTAAAGGGTTTGCTCTCTGAAAAAAAACCAATCTGTTCTTGACCTCATTTTATCTGAATTCTATTTTCAACCAAAGCAGTTTTATATCTTCCAGAAGCACTTTTTATAGTAGGAGCAGAAAATGAAAGTTCATCAAGGTAATGATTAATGTATATGAGTGTTATTGTCAGAGTGCTCTATTTGATGTGATAGATATTGACTGCCGGGACTCACAGTCTAATTGTACTAGTGATGCTGGTTCTTTTGACACAGATTTAGTTCCTTTGCTTTGTCCTCGGTGTTATAGTTTCCACTAGCTGCAGACAGCCCCATCTGCTCTCTCTGATCTACCCCCGCTTTCACTTGGCTGTTTTCCAAACCCAGTAGTCACAATGCTTTAACTGTGTGGAATGTTGATAGGATAAGATTGATTAAAACTGTTATTTCAGAACTTTGGGCATCAGGGTCTTGGAAGAAGAGAAGGCTTGACTAGACTTAATCGACTTTGAAAATGTTAGATTTGCATTTATATTAGTATGCAGGATGGTGTTGTTCAGAGGTATTGGAAGAATTGTATTGCAAGAGCCTGTCATCTAAGCATTCCTTCCTATTCTCACTACAACTTCCCTGGAGGAAAACCAATTTCATTAAAACTTCAACAACTTCCAACAGGGGGAGTTTGCAATTCCAACGGCCCTAATATCTCTATGCCGACGATGAACTCAAACCAACAGGTGCAATATCACACCAAAGAGCCTGAGAGTAAACAACTTGAGTATTCACTTTGAGAATGTGAGCAAACAATGAGTTTTGAACGAGAAGGGAGCTGGCAGCAATATGTCGCCTATCTCTGTAAGAGCCTCCTTACCAACATAAATCATTTCCTATCACTTACTCTTGTCATCCTTCACACGACAAACAAGGTATATTATCTCTGCTCTGGTTTATAAACTCATAGAAAGTCACATTGCTCCACAGCAATTAGGACTTGTATATCTGACCAGCCTATTTTTCCTTGACATCAATCCACATCAATCAGATCTCCCTGGATTCTACTCCAATTTAGTGAAACATTTCCACCACATTCATCAGGGATTCTAACTGCTACAGGGGTAACTGAGACTCTTAACACCATTGATGGGACCACAAGCTGGAGATTCTCTAACCATATCctgtccctcttcttcttcttcgtctatctttctgtctgcctggctcttttttttctttcccctctctctcacatacacacacacacactctctctcacacacacacaaaggtgagCGTTTGGTGAGTGTTTTTTCTCTTGGAGAGCTCCATTTTAATAACATGGGTAAACAAGAGAGTGGATTTCACTTGTATTTTGCCAATCCAAACTGCACATATGTATAATGAAAAGTCAGAAAGGTCATCATAAATAACATTATGAATAAATCAATTGACACACAAAAAGGGGATTATAAATCAGGCAATTAAAAACTCATTTTGAGAAGATTAAACATTGTTCACTGGTTATAAAATCATCGTGTGACCTAtttagtgtctgtctgactgacaccATGTCACTTCTGACATCGCTCTTCTCAATGAAATACTCAAATAGTCCATGCCCCACTCAGTGCAATCTTGATATTTGGACCAGGACAATATTATGTGAGTATCTCTGTTGTCATCAGAATATGTATTTTGACAAAGAACTGAAACTGAAAATGAACTGTTCTGGAAAAGTTActgttgtgttgaggatcaggaaTAAGGCAATTGGATGTTGGTTGGAACAAATGTTGTATTTCTAAAATCAGTTTTTCAGAATAAGTGCAGAATATTTTCACTGCTCTTAAACCCTTTAGGACAGATTTCTATGCTCACTGTGGATGTAGTTGGGGCAAAAGTGGGCCCACATTTGTTACAATGGAAAAAATTCAAGAGAAAAATACCTAATTATTATTTGAAAAGTTTGTACATTTTCTACAAGACTTAAAATATGACTTATACTCACATAAATAGAGGACCTGCTACTTCTGGATACTGTACTTTGTCACACCCGAACACCTTATGTGGGCATCTCTAGCTTATTGCTGCTTCAATAGAATGTACAAGTGCAACCGTGCATATATCTCTTGAAGAAATGGTTGTGTTTCTGCAAGCCATAGTTTTTCCCCCTTATTTTTTATGGAACCAGCTATTTTGTATAGAGCTTATGTTGTTTACAGATAGACTGGTTGTATTTAAATAAAGAAAATCTAAGTCTAA

Function

NR:

description
potassium voltage-gated channel subfamily G member 3-like

GO: NA

KEGG:

id description
K04902 KCNG3, KV6.3; potassium voltage-gated channel subfamily G member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021608300.2 True 5375 mRNA 0.44 2 65898427 65911535

Neighbor

gene id symbol gene type direction distance location
hcar1-3 LOC106576755 coding upstream 69684 65826347 ~ 65828743 (+)
LOC110527123 NA coding upstream 99025 65794987 ~ 65799491 (+)
LOC110527114 LOC106576759 coding upstream 201099 65680024 ~ 65697328 (+)
LOC110527092 tisd coding upstream 416202 65478933 ~ 65482225 (+)
thada LOC106576760 coding upstream 421912 65372299 ~ 65476515 (+)
LOC110527164 LOC106576754 coding downstream 4046 65915581 ~ 65922285 (+)
LOC110532572 LOC106576752 coding downstream 82333 65993868 ~ 65999848 (+)
LOC110527177 LOC106576750 coding downstream 88722 66000257 ~ 66003340 (+)
wu:fj16a03 LOC100135970 coding downstream 102650 66014081 ~ 66019044 (+)
prph2b LOC106576743 coding downstream 439876 66351411 ~ 66355894 (+)
G72960 NA non-coding upstream 66819 65831379 ~ 65831608 (+)
G72954 NA non-coding upstream 92142 65805959 ~ 65806285 (+)
G72858 LOC100136012 non-coding upstream 162563 65686749 ~ 65735864 (+)
G72866 NA non-coding upstream 236125 65657325 ~ 65662302 (+)
G73321 NA non-coding downstream 70134 65981669 ~ 65981892 (+)
G73334 NA non-coding downstream 94498 66006033 ~ 66006238 (+)
G73311 LOC106576750 non-coding downstream 101342 66012877 ~ 66013340 (+)
G73488 NA non-coding downstream 341586 66253121 ~ 66253342 (+)
LOC110526969 stk32c other upstream 996803 64809255 ~ 64946164 (+)
G70011 NA other upstream 2623131 63274963 ~ 63275296 (+)
G67930 mcmbp other upstream 4165039 61729765 ~ 61733388 (+)
G67806 LOC106581772 other upstream 4583175 61314874 ~ 61315252 (+)
G66188 NA other upstream 5956363 59941486 ~ 59942064 (+)
G73515 NA other downstream 376144 66287679 ~ 66288469 (+)
LOC118965274 LOC106576739 other downstream 508960 66417495 ~ 66424081 (+)
G74067 LOC106576735 other downstream 844672 66756207 ~ 66758984 (+)
G74139 NA other downstream 872800 66784335 ~ 66784969 (+)

Expression


Co-expression Network