G72954


Basic Information

Item Value
gene id G72954
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 65805959 ~ 65806285 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU80643
acatactacttcaaTCAGACTGTCTAACCAGTGTCTATGtaacctcgctacttttatagcctcgctactgtatatagcctgtctctttactgttattttatttctttacctacatATTGTTCACCTTACCTTTTTaccactattggttagagcctgtaagtaagcatttcactgtaaggtgatctgttgtattcagcgcacgtgacaaataaactttgatttgatcaccATTTTTCAGCTACTTAGCTGTTAATGCTACTTTGctcacatttttctctctctctctacctctcaccctTTCCTCTTCCCTCAGGAGAGGTCGTCTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80643 True 327 lncRNA 0.39 1 65805959 65806285

Neighbor

gene id symbol gene type direction distance location
LOC110527123 NA coding upstream 6557 65794987 ~ 65799491 (+)
LOC110527114 LOC106576759 coding upstream 108631 65680024 ~ 65697328 (+)
LOC110527092 tisd coding upstream 323734 65478933 ~ 65482225 (+)
thada LOC106576760 coding upstream 329444 65372299 ~ 65476515 (+)
LOC110527082 epcam coding upstream 509855 65291708 ~ 65296104 (+)
hcar1-3 LOC106576755 coding downstream 20062 65826347 ~ 65828743 (+)
LOC110527154 LOC106576753 coding downstream 92142 65898427 ~ 65911535 (+)
LOC110527164 LOC106576754 coding downstream 109296 65915581 ~ 65922285 (+)
LOC110532572 LOC106576752 coding downstream 187583 65993868 ~ 65999848 (+)
LOC110527177 LOC106576750 coding downstream 193972 66000257 ~ 66003340 (+)
G72858 LOC100136012 non-coding upstream 70095 65686749 ~ 65735864 (+)
G72866 NA non-coding upstream 143657 65657325 ~ 65662302 (+)
G72812 NA non-coding upstream 242504 65563113 ~ 65563455 (+)
G72047 NA non-coding upstream 361286 65406430 ~ 65444673 (+)
G72960 NA non-coding downstream 25094 65831379 ~ 65831608 (+)
G73321 NA non-coding downstream 175384 65981669 ~ 65981892 (+)
G73334 NA non-coding downstream 199748 66006033 ~ 66006238 (+)
G73311 LOC106576750 non-coding downstream 206592 66012877 ~ 66013340 (+)
wu:fj16a03 LOC100135970 non-coding downstream 207796 66014081 ~ 66019044 (+)
LOC110526969 stk32c other upstream 904335 64809255 ~ 64946164 (+)
G70011 NA other upstream 2530663 63274963 ~ 63275296 (+)
G67930 mcmbp other upstream 4072571 61729765 ~ 61733388 (+)
G67806 LOC106581772 other upstream 4490707 61314874 ~ 61315252 (+)
G66188 NA other upstream 5863895 59941486 ~ 59942064 (+)
G73515 NA other downstream 481394 66287679 ~ 66288469 (+)
LOC118965274 LOC106576739 other downstream 614210 66417495 ~ 66424081 (+)
G74067 LOC106576735 other downstream 949922 66756207 ~ 66758984 (+)
G74139 NA other downstream 978050 66784335 ~ 66784969 (+)

Expression


Co-expression Network