G18533


Basic Information

Item Value
gene id G18533
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 19689955 ~ 19690162 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU21621
caaggttacagcaaacatgacgacagtctggttcaggcatgaaacacaacaaacaataatccgacaaggacaggaacaaaaacagagagagatataggggactaatcagagggaaaaagggaacaggtgggaaaaggggtgacgaggtggttaggaggagacaaggcacagctgggggaaagagggggtggaaaggtaacctaacaac

Function

NR:

description
PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21621 True 208 lncRNA 0.47 1 19689955 19690162

Neighbor

gene id symbol gene type direction distance location
LOC110503136 LOC106573555 coding upstream 28670 19641892 ~ 19661285 (+)
LOC110503198 LOC106573556 coding upstream 48067 19636713 ~ 19641888 (+)
LOC110502681 LOC106573553 coding upstream 61914 19620185 ~ 19628041 (+)
LOC110502566 LOC106573551 coding upstream 92420 19583179 ~ 19597535 (+)
LOC110502506 LOC106573550 coding upstream 116518 19568684 ~ 19575028 (+)
LOC110503571 LOC106573562 coding downstream 148858 19839020 ~ 19840715 (+)
LOC118944655 NA coding downstream 154250 19844412 ~ 19847992 (+)
LOC110503761 NA coding downstream 160321 19850483 ~ 19855038 (+)
LOC110503939 LOC106573564 coding downstream 173572 19863734 ~ 19865619 (+)
LOC110504002 LOC106573565 coding downstream 211518 19901680 ~ 19906211 (+)
G18523 NA non-coding upstream 17317 19672434 ~ 19672638 (+)
G18516 NA non-coding upstream 25734 19664009 ~ 19664221 (+)
G18513 NA non-coding upstream 26046 19662106 ~ 19663909 (+)
G18515 NA non-coding upstream 27987 19661331 ~ 19661968 (+)
G18501 NA non-coding upstream 56844 19630389 ~ 19633111 (+)
G18536 NA non-coding downstream 2815 19692977 ~ 19693212 (+)
G18564 LOC106573557 non-coding downstream 53223 19743385 ~ 19743625 (+)
G18572 NA non-coding downstream 65201 19755363 ~ 19755945 (+)
G18576 NA non-coding downstream 72328 19762490 ~ 19762785 (+)
G18584 NA non-coding downstream 82591 19772753 ~ 19773188 (+)
G18481 NA other upstream 124734 19564849 ~ 19565221 (+)
G17420 NA other upstream 733747 18882723 ~ 18956208 (+)
ccdc124 cc124 other upstream 1698779 17975918 ~ 17991176 (+)
LOC110495874 LOC106573877 other upstream 2024947 17654164 ~ 17673094 (+)
G19083 NA other downstream 225424 19915586 ~ 19915832 (+)
G19359 NA other downstream 552483 20242645 ~ 20242875 (+)
G19380 LOC100194703 other downstream 586428 20276590 ~ 20276895 (+)
G19400 NA other downstream 619263 20309425 ~ 20309898 (+)

Expression


Co-expression Network