G18621


Basic Information

Item Value
gene id G18621
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 19819899 ~ 19820161 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU21711
catgactgtaagtcactttggataaaagcgtctgctaaacggCATATTATATTATTAAGCTCTGTCCCAGCGCTGAACAATCAAGGTGGATCTTAACAGGCAAGATGCAAAGCACTTCACATCGCTCTAAATAATTAGACTACCCAAATATGTAAACATTGAAGGCATACATATTTTGCACTTATGATTGCATTGTGTTAATAATGAAAATGTTTGTGGCAAATTATAAAAAAGGGCATTTATCACAGGGATCCTCTCCAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21711 True 263 lncRNA 0.60 1 19819899 19820161

Neighbor

gene id symbol gene type direction distance location
LOC110503136 LOC106573555 coding upstream 158614 19641892 ~ 19661285 (+)
LOC110503198 LOC106573556 coding upstream 178011 19636713 ~ 19641888 (+)
LOC110502681 LOC106573553 coding upstream 191858 19620185 ~ 19628041 (+)
LOC110502566 LOC106573551 coding upstream 222364 19583179 ~ 19597535 (+)
LOC110502506 LOC106573550 coding upstream 246462 19568684 ~ 19575028 (+)
LOC110503571 LOC106573562 coding downstream 18859 19839020 ~ 19840715 (+)
LOC118944655 NA coding downstream 24251 19844412 ~ 19847992 (+)
LOC110503761 NA coding downstream 30322 19850483 ~ 19855038 (+)
LOC110503939 LOC106573564 coding downstream 43573 19863734 ~ 19865619 (+)
LOC110504002 LOC106573565 coding downstream 81519 19901680 ~ 19906211 (+)
G18616 NA non-coding upstream 7784 19811793 ~ 19812115 (+)
G18585 NA non-coding upstream 46005 19773599 ~ 19773894 (+)
G18584 NA non-coding upstream 46711 19772753 ~ 19773188 (+)
G18576 NA non-coding upstream 57114 19762490 ~ 19762785 (+)
G18572 NA non-coding upstream 63954 19755363 ~ 19755945 (+)
G19013 NA non-coding downstream 7932 19828093 ~ 19828417 (+)
G19020 NA non-coding downstream 12530 19832691 ~ 19832911 (+)
G19023 nduab non-coding downstream 16377 19836538 ~ 19838797 (+)
G19041 NA non-coding downstream 37990 19858151 ~ 19858718 (+)
G19050 tmprss9 non-coding downstream 46903 19867064 ~ 19867364 (+)
G18481 NA other upstream 254678 19564849 ~ 19565221 (+)
G17420 NA other upstream 863691 18882723 ~ 18956208 (+)
ccdc124 cc124 other upstream 1828723 17975918 ~ 17991176 (+)
LOC110495874 LOC106573877 other upstream 2154891 17654164 ~ 17673094 (+)
G19083 NA other downstream 95425 19915586 ~ 19915832 (+)
G19359 NA other downstream 422484 20242645 ~ 20242875 (+)
G19380 LOC100194703 other downstream 456429 20276590 ~ 20276895 (+)
G19400 NA other downstream 489264 20309425 ~ 20309898 (+)

Expression


Co-expression Network