G21578


Basic Information

Item Value
gene id G21578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 22326430 ~ 22326650 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU25087
CTCTCCACTTAATCATATTGTTTGTGTTCAGGACTACCCTCTAGGTGTTTCAGAATGACGTTGATATTTGACCAGTCATTCACCCCttcctttattattttgtagTCTTTTGTAGAAATGAGCTTACAGCGAAAACAATACACAGCATTGTTTTTGATTGAGTATGaaagccagctcctggtaatcttttcccaATTTGACAGCTGTCTCTGTAATAAGCC

Function

NR:

description
PREDICTED: zinc finger MYM-type protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25087 True 221 lncRNA 0.39 1 22326430 22326650

Neighbor

gene id symbol gene type direction distance location
LOC110508905 twf1 coding upstream 100326 22212332 ~ 22226104 (+)
LOC110508655 LOC100380741 coding upstream 218573 22024629 ~ 22107857 (+)
LOC110508592 LOC106613751 coding upstream 414914 21809564 ~ 21911516 (+)
LOC118946025 LOC106604946 coding upstream 499301 21819189 ~ 21827129 (+)
LOC110508526 bsg coding upstream 523527 21792456 ~ 21802903 (+)
zgc:110339 LOC106573615 coding downstream 105660 22432310 ~ 22435150 (+)
LOC110513869 LOC106560949 coding downstream 294016 22620666 ~ 22623478 (+)
LOC110510174 LOC106573623 coding downstream 387024 22713674 ~ 22869379 (+)
LOC110511054 NA coding downstream 1460843 23787493 ~ 23793379 (+)
LOC110511247 LOC106573632 coding downstream 1478364 23805014 ~ 23822354 (+)
G21573 NA non-coding upstream 9726 22316491 ~ 22316704 (+)
G21545 NA non-coding upstream 58455 22267755 ~ 22267975 (+)
G21533 NA non-coding upstream 76793 22249351 ~ 22249637 (+)
G21528 NA non-coding upstream 82715 22239891 ~ 22243715 (+)
G21299 NA non-coding upstream 274078 22052085 ~ 22052352 (+)
G21580 NA non-coding downstream 2302 22328952 ~ 22329228 (+)
G21598 NA non-coding downstream 30192 22356842 ~ 22357072 (+)
G21608 NA non-coding downstream 40699 22367349 ~ 22367689 (+)
G21614 NA non-coding downstream 55188 22381838 ~ 22382151 (+)
G21618 NA non-coding downstream 64751 22391401 ~ 22391618 (+)
G20773 NA other upstream 758242 21567545 ~ 21568188 (+)
G19400 NA other upstream 2016532 20309425 ~ 20309898 (+)
G19380 LOC100194703 other upstream 2049535 20276590 ~ 20276895 (+)
G19359 NA other upstream 2083555 20242645 ~ 20242875 (+)
G19083 NA other upstream 2410598 19915586 ~ 19915832 (+)
G23109 NA other downstream 1211746 23538396 ~ 23538863 (+)
G23135 NA other downstream 1247942 23574592 ~ 23574995 (+)
LOC110511358 LOC106573633 other downstream 1546371 23872914 ~ 23905175 (+)
ccl4 ccl4 other downstream 2178005 24504638 ~ 24506125 (+)
G24123 NA other downstream 2223875 24550525 ~ 24552435 (+)

Expression


Co-expression Network