XLOC_020036 (si:ch73-92e7.6)


Basic Information

Item Value
gene id XLOC_020036
gene name si:ch73-92e7.6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 2574765 ~ 2580575 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039975
agCTCGTCCTCCTTCAGTTCAGCTGTAAATACTGGAATATTCCCATCAGTTTACAAGTGAAGACGAGCATCAGACCATCAGGAAGAAGAGAAATCtgcaaagacagagtttattgaaggacagtgagaagatgagtgatccagaaccctgcagaattaaacaggaagagactgaagaactaatagatGTGAAGCaggagagtgaagaactgagtgaagatgaggagaaacatcaggTCAAGAGTGTAGAAGAAACTCAATCAGAGACTGAACAAAGTATTTTAATGGTAAGAACAGCGGTTAAAGATttgacctgcactcagtgtggaaagacttTCAAGCGTAAAAACACTCTGAAtcatcacatgatgatccacactggagagaaaccgtacaagtgttcacactgcgacaagagattcagatATTCAGGACAACTGAAAAAACAtgagaggatccacactggagagaaaccgtacaagtgttcacactgcgacaagagattcaacGATTCAGGACGCCTGAAAACACAcaagatgctgcacactggagagaaaccttacaagtgttcacactgcgacaagagatttcGGGATTTAGAAAACCTCAAaatacatgagaggattcacactggagagaaaccgtatcaCTGCACTGATTGCGGGATGAGTTTCAGACATGTATCTTCTCTAAGAACACACACAGAAATCTTTCACAACCCGATGGTGAAGCTGGAGGAAAGTGTCAATAGTCAACATTCATGCTccgagtgtggaaagagttttgcacatcattcatttttaaaaacacatcagaagatccacagtgctgtgagagagtttgtgtgctTTGTGTGTA

Function

symbol description
si:ch73-92e7.6 Predicted to enable metal ion binding activity.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081031-35 Predicted to enable metal ion binding activity.

Ensembl:

ensembl_id ENSDARG00000094309

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039975 True 857 mRNA 0.42 3 2574765 2580575

Neighbor

gene id symbol gene type direction distance location
XLOC_020034 zgc:175284 coding upstream 16186 2549044 ~ 2558579 (+)
XLOC_020033 NA coding upstream 27887 2546086 ~ 2546878 (+)
XLOC_020032 si:ch73-92e7.4 coding upstream 36074 2533514 ~ 2538691 (+)
XLOC_020031 znf1003 coding upstream 44782 2524615 ~ 2529983 (+)
XLOC_020030 zgc:173726 coding upstream 52909 2510828 ~ 2521856 (+)
XLOC_020037 CU570894.1 coding downstream 18423 2598998 ~ 2621601 (+)
XLOC_020038 CU896630.1 coding downstream 51043 2631618 ~ 2631738 (+)
XLOC_020039 znf1173 coding downstream 52386 2632961 ~ 2639237 (+)
XLOC_020040 znf1162 coding downstream 79930 2660505 ~ 2668782 (+)
XLOC_020041 zgc:194221 coding downstream 100320 2680895 ~ 2682759 (+)
XLOC_020000 NA non-coding upstream 284108 2007241 ~ 2290657 (+)
XLOC_020048 NA non-coding downstream 212000 2792575 ~ 2795451 (+)
XLOC_020050 NA non-coding downstream 233888 2814463 ~ 2827856 (+)
XLOC_020054 NA non-coding downstream 341576 2922151 ~ 2927616 (+)
XLOC_020058 NA non-coding downstream 529461 3110036 ~ 3110513 (+)

Expression


Co-expression Network