XLOC_020038 (CU896630.1)


Basic Information

Item Value
gene id XLOC_020038
gene name CU896630.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 2631618 ~ 2631738 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039978
ACTTACAGGCTGTTGCCCTCTAGAGGTGGCTTAAAGATAGGTAGGAACCCccctaagcagggctgagcctggtcagtatctggatgggagacctcatgagaaagctaggtttctgcaagtg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000084032

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039978 True 121 rRNA 0.52 1 2631618 2631738

Neighbor

gene id symbol gene type direction distance location
XLOC_020026 si:ch73-92e7.4 coding upstream 2147 2459591 ~ 2629471 (+)
XLOC_020037 CU570894.1 coding upstream 10017 2598998 ~ 2621601 (+)
XLOC_020036 si:ch73-92e7.6 coding upstream 51043 2574765 ~ 2580575 (+)
XLOC_020034 zgc:175284 coding upstream 73039 2549044 ~ 2558579 (+)
XLOC_020033 NA coding upstream 84740 2546086 ~ 2546878 (+)
XLOC_020039 znf1173 coding downstream 1223 2632961 ~ 2639237 (+)
XLOC_020040 znf1162 coding downstream 28767 2660505 ~ 2668782 (+)
XLOC_020041 zgc:194221 coding downstream 49157 2680895 ~ 2682759 (+)
XLOC_020042 si:dkey-20i20.15 coding downstream 54145 2685883 ~ 2870110 (+)
XLOC_020043 znf1171 coding downstream 77729 2709467 ~ 2712891 (+)
XLOC_020000 NA non-coding upstream 340961 2007241 ~ 2290657 (+)
XLOC_020048 NA non-coding downstream 160837 2792575 ~ 2795451 (+)
XLOC_020050 NA non-coding downstream 182725 2814463 ~ 2827856 (+)
XLOC_020054 NA non-coding downstream 290413 2922151 ~ 2927616 (+)
XLOC_020058 NA non-coding downstream 478298 3110036 ~ 3110513 (+)
XLOC_020061 NA non-coding downstream 587265 3219003 ~ 3222417 (+)
XLOC_020013 NA non-coding upstream 392525 2237152 ~ 2239093 (+)
XLOC_020007 BX640537.1 non-coding upstream 453155 2175857 ~ 2178463 (+)
XLOC_020006 BX640537.2 non-coding upstream 468172 2160039 ~ 2163446 (+)

Expression


Co-expression Network