XLOC_020006 (BX640537.2)


Basic Information

Item Value
gene id XLOC_020006
gene name BX640537.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 2160039 ~ 2163446 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039898
CCGTGATGACATCACTGCTGACGCGTTCattcagcgtcgagtcttcagGGCTGAGATGTGAAGGTGAAGGAGGAGAGCGAAGaactgagtgaagatgaggagaaacatcatgtcaaaactGAAATCGAAGCTCAGACAAAGACAGAAGAtagttttgtaatggaaagaacAGCTGTGAAATGTTTCACCTGCACTGAGTGTGGAAAGAATTTCAGCCACGCATACAGTCTCGAGtgtcacatgaggatccacactggagagaaaccttacaagtgttcataTTGCGAGAAGAGCTTCAATTGGTCAGGAAACCTGAATATTCAtgagaggatccacactggagagaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099895

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039898 True 347 processed_transcript 0.45 2 2160039 2163446

Neighbor

gene id symbol gene type direction distance location
XLOC_020005 znf1164 coding upstream 12200 2143107 ~ 2147839 (+)
XLOC_020004 si:dkeyp-79b7.3 coding upstream 29610 2129384 ~ 2130429 (+)
XLOC_020003 znf1155 coding upstream 34204 2120815 ~ 2125835 (+)
XLOC_020002 znf1144 coding upstream 41917 2111120 ~ 2118122 (+)
XLOC_020001 znf1174 coding upstream 125888 2032023 ~ 2034151 (+)
XLOC_020007 BX640537.1 coding downstream 12411 2175857 ~ 2178463 (+)
XLOC_020008 znf1152 coding downstream 19664 2183110 ~ 2187088 (+)
XLOC_020009 znf1165 coding downstream 25910 2189356 ~ 2389563 (+)
XLOC_020010 si:dkeyp-79b7.12 coding downstream 44056 2207502 ~ 2210578 (+)
XLOC_020011 znf1172 coding downstream 54489 2217935 ~ 2224093 (+)
XLOC_019991 BX640576.1 non-coding upstream 279369 1878147 ~ 1880670 (+)
XLOC_019977 BX649416.3 non-coding upstream 427929 1725568 ~ 1732110 (+)
XLOC_019971 NA non-coding upstream 494568 1660187 ~ 1665471 (+)
XLOC_019970 BX649416.2 non-coding upstream 506101 1650128 ~ 1653938 (+)
XLOC_019963 AL954741.1 non-coding upstream 582293 1576863 ~ 1577746 (+)
XLOC_020013 NA non-coding downstream 73706 2237152 ~ 2239093 (+)
XLOC_020033 NA non-coding downstream 382640 2546086 ~ 2546878 (+)
XLOC_020038 CU896630.1 non-coding downstream 468172 2631618 ~ 2631738 (+)
XLOC_020048 NA non-coding downstream 629129 2792575 ~ 2795451 (+)

Expression


Co-expression Network