XLOC_020092 (tppp)


Basic Information

Item Value
gene id XLOC_020092
gene name tppp
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 5478353 ~ 5479326 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040054
TCTCCAACCTGTGTGAAGCCCAAGCATTTAAAGGAAACAATGGAGCGTCTGCGagtctctctctttcttctcCTGCTCTTCTGTTCACCGTGTCTGAGTGAAGGGAAAACTTTCTTTACTCATCTCGGCACGCTGTGCGCAGAAGACTGCAAGCCTGACGGCGGCGAATACAAGTGCAAGAGCACCGATGAAGACGGAAAGAGCCAAAGCATGTACTGTTCACCTCAGGAGAACGTGGACTTCCGGGGCAGACAGTGCCAAGCTGACAGCAAGTGTGCTAAACATGGAGAAGACTACAGCTGGTGCAGGATTAACACCTTCAGCTGGGGATACTGTGGGCTGGTGAAGGAGGACCAGACCCTCGGAGATGCTGGAGAAGACCACCACAACACTTCTCCACATCGCAACAGGAGAGATGAAGTAGTTTTAGACACCATTGATGATTTAGCTAACCGTAGAAGAACAACTTTTCTAGCAGAGGGAGCTCAAAATCACATCGCTGATGGCAACAACTATAGAAGTGAGGCTGCAATCCTAATCGGTAACTGGGATAATTCCTACCTGGTGAGCCAGACCCGTTCCAATCTGATCAAAACAAAATCTATTCGAATTGACATGCAAGGCATGGTCAACCGGCATAATTTGAGATACCACAACCTGCAGATCCAGGTGAATGTGCCACGTGGTGGAAATATGCCAAGCACTACTTTGTCTCAGGTTTTTGTACCTGAGAACATTTATGTCCCAGACCGATATGTGCGCAGAGCCTTCCAGGAGAGCATGGTTCGCAGAGCTCGTATTTTCATTGATGTTTCAAGCATCAACATTCCACGCAAGCTCATTTCAGGCTACATGTTTTGTAGAAAGCCCAAATAATACAAGAAAGCTCAGATA

Function

symbol description
tppp Enables several functions, including GTPase activity; magnesium ion binding activity; and protein homodimerization activity. Involved in several processes, including microtubule cytoskeleton organization; negative regulation of tubulin deacetylation; and positive regulation of protein polymerization. Located in several cellular components, including mitochondrion; mitotic spindle; and perinuclear region of cytoplasm. Colocalizes with microtubule and microtubule bundle.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104399

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040054 True 894 mRNA 0.47 2 5478353 5479326

Neighbor

gene id symbol gene type direction distance location
XLOC_020091 MYO9B coding upstream 50110 5331675 ~ 5428243 (+)
XLOC_020090 mir24-4 coding upstream 170779 5307485 ~ 5307574 (+)
XLOC_020089 dre-mir-27e coding upstream 178297 5299951 ~ 5300056 (+)
XLOC_020088 NA coding upstream 181277 5296092 ~ 5297076 (+)
XLOC_020087 dre-mir-23a-1 coding upstream 185052 5293213 ~ 5293301 (+)
XLOC_020093 si:ch73-256j6.2 coding downstream 52677 5532003 ~ 5568610 (+)
XLOC_020094 GGH coding downstream 95626 5574952 ~ 5587976 (+)
XLOC_020095 NA coding downstream 158559 5637885 ~ 5640683 (+)
XLOC_020096 tma7 coding downstream 184203 5663529 ~ 5668138 (+)
XLOC_020097 dnase1l4.2 coding downstream 203309 5682635 ~ 5700482 (+)
XLOC_020083 NA non-coding upstream 355796 5118313 ~ 5122557 (+)
XLOC_020100 NA non-coding downstream 327525 5806851 ~ 5825209 (+)
XLOC_020101 BX005329.3 non-coding downstream 331551 5810877 ~ 5812454 (+)
XLOC_020104 NA non-coding downstream 429368 5908694 ~ 5923242 (+)
XLOC_020105 NA non-coding downstream 442642 5921968 ~ 5939401 (+)

Expression


Co-expression Network