XLOC_020095


Basic Information

Item Value
gene id XLOC_020095
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 5637885 ~ 5640683 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041866
CTCCTGCTGATGTTGTTTTCTGTAATGCGTTCATCTTATACAACACTAACGCTCCGGCCTCCAGCGTCCACTCTCGGCTGACGGGATGCCGCTGCACGTAAGCCGTCAGACCCACAGCGGAGGCTCCCTGTCCTGTGGTGAACACCGCTCGACTCGCCACCTTCTCCACGTACTTCAGGAACTGAGATTTAGCCGTGCCGGGATCTCCACACAGGAGGACGTTTATATCACCACGCACCTTGTGCTTCCCACCTGACCAAAACACACAGATGTGATCATGTAATTGCCTGTACATTTCCAATATTTACTTACTACACCCAATGCCGTGATGCGATAAAATCAATGGATTCTATGTTAAAAGGAGCTTTTGTCTATAGTTTCTACTTCTGCAATGTCACGGCACaataacagcataaactactatgacaatgatcacctcag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041866 True 441 lncRNA 0.48 2 5637885 5640683

Neighbor

gene id symbol gene type direction distance location
XLOC_020094 GGH coding upstream 49909 5574952 ~ 5587976 (+)
XLOC_020093 si:ch73-256j6.2 coding upstream 69275 5532003 ~ 5568610 (+)
XLOC_020092 tppp coding upstream 158559 5478353 ~ 5479326 (+)
XLOC_020091 MYO9B coding upstream 209642 5331675 ~ 5428243 (+)
XLOC_020090 mir24-4 coding upstream 330311 5307485 ~ 5307574 (+)
XLOC_020096 tma7 coding downstream 22846 5663529 ~ 5668138 (+)
XLOC_020097 dnase1l4.2 coding downstream 41952 5682635 ~ 5700482 (+)
XLOC_020098 si:dkey-222f2.1 coding downstream 87070 5727753 ~ 5739360 (+)
XLOC_020099 cox14 coding downstream 111574 5752257 ~ 5756384 (+)
XLOC_020100 NA coding downstream 166168 5806851 ~ 5825209 (+)
XLOC_020089 dre-mir-27e non-coding upstream 337829 5299951 ~ 5300056 (+)
XLOC_020088 NA non-coding upstream 340809 5296092 ~ 5297076 (+)
XLOC_020087 dre-mir-23a-1 non-coding upstream 344584 5293213 ~ 5293301 (+)
XLOC_020083 NA non-coding upstream 515328 5118313 ~ 5122557 (+)
XLOC_020101 BX005329.3 non-coding downstream 170194 5810877 ~ 5812454 (+)
XLOC_020104 NA non-coding downstream 268011 5908694 ~ 5923242 (+)
XLOC_020105 NA non-coding downstream 281285 5921968 ~ 5939401 (+)
XLOC_020111 NA non-coding downstream 525121 6165804 ~ 6166752 (+)

Expression


Co-expression Network