XLOC_002011 (CR790388.2)


Basic Information

Item Value
gene id XLOC_002011
gene name CR790388.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 16575078 ~ 16575175 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003924
caggttctctggcttgacgtcccggtgcaggacaCCACGGCTCTCACAGTGTTTCAGCGCTgcgatcagctgcaccagcactttcttggtCAGACGCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000087414

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003924 True 98 miRNA 0.59 1 16575078 16575175

Neighbor

gene id symbol gene type direction distance location
XLOC_002010 isoc1 coding upstream 11125 16547259 ~ 16563953 (+)
XLOC_002009 slc27a6 coding upstream 34475 16501699 ~ 16540603 (+)
XLOC_002008 NA coding upstream 178798 16374860 ~ 16396280 (+)
XLOC_002007 slc12a2 coding upstream 264899 16225117 ~ 16310179 (+)
XLOC_002006 ctxn3 coding upstream 382465 16188761 ~ 16192613 (+)
XLOC_002012 CR790388.1 coding downstream 9207 16584382 ~ 16587854 (+)
XLOC_002013 chsy3 coding downstream 17676 16592851 ~ 16748593 (+)
XLOC_002014 CABZ01024659.1 coding downstream 181371 16756546 ~ 16757842 (+)
XLOC_002015 UNC13B coding downstream 336776 16911951 ~ 17019944 (+)
XLOC_002016 CR855996.2 coding downstream 451695 17026870 ~ 17062546 (+)
XLOC_002000 dre-mir-24-1 non-coding upstream 614164 15960835 ~ 15960914 (+)
XLOC_001999 dre-mir-27d non-coding upstream 620263 15954727 ~ 15954815 (+)
XLOC_001998 dre-mir-23b non-coding upstream 620419 15954579 ~ 15954659 (+)
XLOC_001997 NA non-coding upstream 621608 15937306 ~ 15953470 (+)
XLOC_002017 NA non-coding downstream 512079 17087254 ~ 17087788 (+)
XLOC_002019 BX324123.6 non-coding downstream 544742 17119917 ~ 17120049 (+)
XLOC_002020 BX324123.5 non-coding downstream 548193 17123368 ~ 17123500 (+)
XLOC_002021 BX324123.3 non-coding downstream 550165 17125340 ~ 17125466 (+)
XLOC_002022 BX324123.2 non-coding downstream 552141 17127316 ~ 17127448 (+)

Expression


Co-expression Network